Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1651

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,941,193	+		Rru_A1650	0.47	+1.3
1,941,193	+		Rru_A1650	0.47	-0.1
1,941,194	-		Rru_A1650	0.47	-0.1
1,941,194	-		Rru_A1650	0.47	-0.1
1,941,194	-		Rru_A1650	0.47	-0.7
1,941,397	+		Rru_A1650	0.65	+0.7
1,941,398	-		Rru_A1650	0.65	+1.9
1,941,539	+		Rru_A1650	0.78	-0.1
1,941,539	+		Rru_A1650	0.78	-0.7
1,941,540	-		Rru_A1650	0.78	+0.1
1,941,541	+		Rru_A1650	0.78	+2.2
1,941,541	+		Rru_A1650	0.78	+1.1
1,941,541	+		Rru_A1650	0.78	+1.1
1,941,745	-				+1.3
1,941,772	-				+0.4
1,941,773	+				-0.1
1,941,773	+				+1.4
1,941,774	-				+1.3
1,941,774	-				-0.1
1,942,005	+		Rru_A1651	0.14	-0.1
1,942,005	+		Rru_A1651	0.14	+1.5
1,942,005	+		Rru_A1651	0.14	+0.6
1,942,005	+		Rru_A1651	0.14	+1.9
1,942,005	+		Rru_A1651	0.14	-0.1
1,942,006	-		Rru_A1651	0.14	+1.2
1,942,279	+		Rru_A1651	0.37	-0.9
1,942,280	-		Rru_A1651	0.37	+1.7
1,942,329	+		Rru_A1651	0.41	+1.5
1,942,330	-		Rru_A1651	0.42	+0.9
1,942,330	-		Rru_A1651	0.42	+1.0
1,942,347	+		Rru_A1651	0.43	+2.8
1,942,347	+		Rru_A1651	0.43	-0.1
1,942,347	+		Rru_A1651	0.43	+1.6
1,942,347	+		Rru_A1651	0.43	+1.1
1,942,348	-		Rru_A1651	0.43	-0.1
1,942,348	-		Rru_A1651	0.43	+0.9
1,942,348	-		Rru_A1651	0.43	+1.0
1,942,348	-		Rru_A1651	0.43	+1.3
1,942,348	-		Rru_A1651	0.43	+1.9
1,942,368	+		Rru_A1651	0.45	+1.2
1,942,368	+		Rru_A1651	0.45	+0.6
1,942,369	-		Rru_A1651	0.45	+2.9
1,942,369	-		Rru_A1651	0.45	-0.1
1,942,369	-		Rru_A1651	0.45	-0.1
1,942,369	-		Rru_A1651	0.45	-0.1
1,942,369	-		Rru_A1651	0.45	+0.9
1,942,369	-		Rru_A1651	0.45	+1.1
1,942,786	+		Rru_A1651	0.81	+2.4
1,942,786	+		Rru_A1651	0.81	+0.5
1,942,786	+		Rru_A1651	0.81	-0.1
1,942,786	+		Rru_A1651	0.81	-0.1
1,942,787	-		Rru_A1651	0.81	-0.1
1,942,787	-		Rru_A1651	0.81	+0.6
1,942,787	-		Rru_A1651	0.81	+0.7
1,942,787	-		Rru_A1651	0.81	+2.4
1,942,854	+		Rru_A1651	0.86	+1.3
1,942,854	+		Rru_A1651	0.86	-1.1
1,942,854	+		Rru_A1651	0.86	-0.1
1,942,872	+		Rru_A1651	0.88	-0.1
1,942,872	+		Rru_A1651	0.88	-0.1
1,942,872	+		Rru_A1651	0.88	-0.1
1,942,872	+		Rru_A1651	0.88	-0.1
1,943,102	-		Rru_A1652	0.12	-0.1
1,943,102	-		Rru_A1652	0.12	-0.1
1,943,303	-		Rru_A1652	0.34	+0.4
1,943,345	+		Rru_A1652	0.39	+1.8
1,943,345	+		Rru_A1652	0.39	-0.1
1,943,345	+		Rru_A1652	0.39	-0.1
1,943,346	-		Rru_A1652	0.39	+0.6
1,943,409	+		Rru_A1652	0.46	+0.9
1,943,410	-		Rru_A1652	0.46	+0.6
1,943,567	-		Rru_A1652	0.63	-0.1
1,943,708	-		Rru_A1652	0.79	-0.1
1,943,708	-		Rru_A1652	0.79	+1.5