Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1648

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,939,071	-		Rru_A1647	0.88	+2.1
1,939,238	+				+0.9
1,939,286	-				+0.5
1,939,354	+				+0.8
1,939,414	-				+1.8
1,939,461	+				+1.1
1,939,461	+				+1.0
1,939,576	+				-0.5
1,939,639	-				+2.9
1,939,639	-				+1.0
1,939,651	+				+0.9
1,939,652	-				-0.1
1,939,652	-				-0.1
1,939,664	-				+2.2
1,939,741	+				+2.1
1,939,741	+				-0.1
1,939,742	-				-0.1
1,939,759	+				+0.7
1,939,759	+				-0.1
1,939,760	-				-0.1
1,939,760	-				+1.3
1,939,820	+				+0.9
1,939,820	+				-0.1
1,939,821	-				-0.1
1,939,821	-				+1.7
1,939,862	-				-0.1
1,939,875	-				-0.1
1,939,878	+				+1.6
1,939,943	+				+2.5
1,939,943	+				-0.1
1,939,943	+				-0.1
1,939,943	+				+1.2
1,939,944	-				-0.1
1,939,991	+				-0.1
1,939,997	-				+1.4
1,940,002	-				-0.1
1,940,016	+				+0.9
1,940,017	-				-0.1
1,940,304	+		Rru_A1648	0.74	-0.1
1,940,305	-		Rru_A1648	0.74	-1.1
1,940,523	-		Rru_A1649	0.19	+0.7
1,940,523	-		Rru_A1649	0.19	+1.2
1,940,653	+				-0.1
1,940,768	-		Rru_A1650	0.10	-0.1
1,941,193	+		Rru_A1650	0.47	+1.3
1,941,193	+		Rru_A1650	0.47	-0.1
1,941,194	-		Rru_A1650	0.47	-0.1
1,941,194	-		Rru_A1650	0.47	-0.1
1,941,194	-		Rru_A1650	0.47	-0.7