Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1497

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,767,115	-				+1.3
1,767,327	+		Rru_A1496	0.24	+1.5
1,767,327	+		Rru_A1496	0.24	+2.5
1,767,327	+		Rru_A1496	0.24	+0.9
1,767,327	+		Rru_A1496	0.24	+1.7
1,767,327	+		Rru_A1496	0.24	+1.1
1,767,327	+		Rru_A1496	0.24	+1.8
1,767,327	+		Rru_A1496	0.24	+2.7
1,767,328	-		Rru_A1496	0.24	-1.1
1,767,328	-		Rru_A1496	0.24	+1.0
1,767,329	+		Rru_A1496	0.24	+2.2
1,767,330	-		Rru_A1496	0.24	+1.5
1,767,342	+		Rru_A1496	0.25	+1.5
1,767,342	+		Rru_A1496	0.25	+2.5
1,767,342	+		Rru_A1496	0.25	-0.6
1,767,342	+		Rru_A1496	0.25	+2.1
1,767,342	+		Rru_A1496	0.25	+1.2
1,767,342	+		Rru_A1496	0.25	+1.1
1,767,343	-		Rru_A1496	0.25	+1.5
1,767,343	-		Rru_A1496	0.25	+2.2
1,767,343	-		Rru_A1496	0.25	+0.9
1,767,346	-		Rru_A1496	0.25	+1.5
1,767,346	-		Rru_A1496	0.25	-0.1
1,767,506	-		Rru_A1496	0.41	+2.4
1,768,068	+				+1.1
1,768,069	-				+0.9
1,768,297	+		Rru_A1497	0.12	-0.1
1,768,298	-		Rru_A1497	0.12	+1.8
1,768,298	-		Rru_A1497	0.12	-0.1
1,768,580	+		Rru_A1497	0.28	+0.7
1,768,977	+		Rru_A1497	0.52	+1.5
1,768,977	+		Rru_A1497	0.52	+2.2
1,768,978	-		Rru_A1497	0.52	+0.2
1,768,978	-		Rru_A1497	0.52	-1.6
1,768,978	-		Rru_A1497	0.52	-0.1
1,769,172	-		Rru_A1497	0.64	-1.7
1,769,313	-		Rru_A1497	0.72	+1.9
1,769,411	+		Rru_A1497	0.78	+0.7
1,769,411	+		Rru_A1497	0.78	+0.3
1,769,411	+		Rru_A1497	0.78	+0.1
1,769,412	-		Rru_A1497	0.78	+1.9
1,769,412	-		Rru_A1497	0.78	+1.3
1,769,412	-		Rru_A1497	0.78	-0.1
1,769,412	-		Rru_A1497	0.78	+0.6
1,769,651	+				+1.0
1,769,651	+				-0.1
1,769,651	+				+1.3
1,769,651	+				+1.1
1,769,651	+				+1.1
1,769,720	+				+0.1
1,770,143	+		Rru_A1499	0.17	-0.1
1,770,591	-				+1.7
1,770,591	-				-0.1
1,770,622	+				-0.1
1,770,622	+				+0.9
1,770,622	+				+1.1
1,770,623	-				+0.4