Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1470
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
|---|---|---|---|---|---|
| remove | |||||
| 1,736,402 | - | Rru_A1469 | 0.30 | +0.7 | |
| 1,737,144 | + | +1.2 | |||
| 1,737,435 | + | Rru_A1470 | 0.73 | -1.1 | |
| 1,737,436 | - | Rru_A1470 | 0.73 | -0.1 | |
| 1,737,559 | + | -0.1 | |||
| 1,737,812 | - | Rru_A1471 | 0.35 | -0.1 | |
| 1,738,143 | + | Rru_A1471 | 0.85 | +1.2 | |
| 1,738,143 | + | Rru_A1471 | 0.85 | +2.5 | |
| 1,738,143 | + | Rru_A1471 | 0.85 | -0.1 | |
| 1,738,144 | - | Rru_A1471 | 0.85 | +0.9 | |
| 1,738,144 | - | Rru_A1471 | 0.85 | -0.8 |
Or see this region's nucleotide sequence