Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1414

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,671,292	+		Rru_A1413	0.53	+0.3
1,671,293	-		Rru_A1413	0.53	+0.2
1,671,293	-		Rru_A1413	0.53	+1.5
1,671,355	+		Rru_A1413	0.62	+1.6
1,671,355	+		Rru_A1413	0.62	-0.1
1,671,754	-				+0.5
1,671,874	+				-0.1
1,671,874	+				-0.4
1,671,874	+				-0.1
1,671,875	-				-1.1
1,671,912	+				+1.5
1,671,981	-				+1.4
1,671,985	+				-0.1
1,671,985	+				-0.1
1,671,986	-				-0.1
1,672,320	+		Rru_A1414	0.38	-0.1
1,672,321	-		Rru_A1414	0.38	+0.7
1,672,495	-		Rru_A1414	0.60	+1.1
1,672,495	-		Rru_A1414	0.60	+1.0
1,672,508	+		Rru_A1414	0.62	-0.1
1,672,508	+		Rru_A1414	0.62	-1.7
1,672,509	-		Rru_A1414	0.62	-0.4
1,672,515	-		Rru_A1414	0.63	+0.5
1,672,570	-		Rru_A1414	0.70	-0.1
1,672,851	+				-0.5
1,672,851	+				-0.1
1,672,857	+				-0.1
1,672,857	+				+0.7
1,672,857	+				+2.1
1,672,861	+				+1.1
1,673,036	+		Rru_A1415	0.29	-0.1
1,673,037	-		Rru_A1415	0.29	+0.9
1,673,037	-		Rru_A1415	0.29	+1.2
1,673,071	-		Rru_A1415	0.36	-0.1
1,673,117	-		Rru_A1415	0.46	+1.9
1,673,117	-		Rru_A1415	0.46	+0.8
1,673,273	+		Rru_A1415	0.80	+1.2
1,673,273	+		Rru_A1415	0.80	+1.1
1,673,274	-		Rru_A1415	0.80	-0.1
1,673,323	+				-0.1