Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1407

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,660,887	+		Rru_A1406	0.34	-0.1
1,661,306	-		Rru_A1406	0.72	+3.1
1,661,308	+		Rru_A1406	0.72	-0.1
1,661,308	+		Rru_A1406	0.72	-0.1
1,661,308	+		Rru_A1406	0.72	-0.1
1,661,308	+		Rru_A1406	0.72	-0.1
1,661,308	+		Rru_A1406	0.72	+1.7
1,661,308	+		Rru_A1406	0.72	-0.1
1,661,308	+		Rru_A1406	0.72	-0.1
1,661,309	-		Rru_A1406	0.72	+1.2
1,661,309	-		Rru_A1406	0.72	-0.1
1,661,309	-		Rru_A1406	0.72	+1.2
1,661,309	-		Rru_A1406	0.72	+0.7
1,661,309	-		Rru_A1406	0.72	+1.8
1,661,476	+		Rru_A1406	0.88	+1.3
1,661,476	+		Rru_A1406	0.88	+1.0
1,661,476	+		Rru_A1406	0.88	+1.3
1,661,477	-		Rru_A1406	0.88	-0.1
1,661,479	-		Rru_A1406	0.88	+2.2
1,661,479	-		Rru_A1406	0.88	-0.1
1,661,479	-		Rru_A1406	0.88	+1.5
1,662,063	+		Rru_A1407	0.79	-0.1
1,662,063	+		Rru_A1407	0.79	+0.5
1,662,064	-		Rru_A1407	0.79	-0.1
1,662,065	+		Rru_A1407	0.79	-0.2
1,662,085	+		Rru_A1407	0.83	+0.9
1,662,086	-		Rru_A1407	0.83	-0.1
1,662,086	-		Rru_A1407	0.83	+1.3
1,662,086	-		Rru_A1407	0.83	+1.5
1,662,174	+				+0.9
1,662,174	+				-0.7
1,662,174	+				-0.5
1,662,174	+				-0.1
1,662,174	+				+0.9
1,662,175	-				+1.7
1,662,175	-				+1.7
1,662,175	-				-0.1
1,662,429	+				+0.9
1,662,432	+				-2.7
1,662,432	+				-0.1
1,662,432	+				+1.2
1,662,432	+				+1.4
1,662,432	+				-0.1
1,662,433	-				-0.1
1,662,433	-				+1.4
1,662,433	-				+3.5
1,662,433	-				+0.8
1,662,433	-				+1.7
1,662,433	-				+1.5
1,662,433	-				+1.1
1,662,433	-				+0.7
1,662,433	-				+1.0
1,662,436	-				-0.1
1,663,006	-		Rru_A1408	0.42	-0.1