Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1392

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,642,436	+				+1.2
1,642,437	-				+1.8
1,642,437	-				-0.1
1,642,445	+				-0.1
1,642,445	+				+1.5
1,642,966	+		Rru_A1391	0.68	-0.1
1,642,966	+		Rru_A1391	0.68	+1.7
1,642,966	+		Rru_A1391	0.68	-0.1
1,643,324	+				+1.0
1,643,325	-				-1.1
1,643,325	-				+0.5
1,643,347	-				-0.1
1,643,423	+				+0.2
1,643,423	+				-0.1
1,643,423	+				+1.3
1,643,424	-				-1.1
1,643,424	-				-0.1
1,643,424	-				-1.1
1,643,424	-				-0.1
1,643,574	+		Rru_A1392	0.21	+0.5
1,643,575	-		Rru_A1392	0.21	-1.2
1,643,625	-		Rru_A1392	0.24	+1.0
1,643,625	-		Rru_A1392	0.24	+0.7
1,643,720	+		Rru_A1392	0.31	-0.1
1,643,720	+		Rru_A1392	0.31	+1.0
1,643,720	+		Rru_A1392	0.31	+1.2
1,643,720	+		Rru_A1392	0.31	+1.3
1,643,720	+		Rru_A1392	0.31	+2.0
1,643,751	+		Rru_A1392	0.33	-0.1
1,643,751	+		Rru_A1392	0.33	+0.1
1,643,751	+		Rru_A1392	0.33	-0.1
1,644,221	+		Rru_A1392	0.67	+1.3
1,644,222	-		Rru_A1392	0.67	+1.6
1,644,596	+				-0.1
1,644,661	+				-0.1
1,644,691	+				+0.5
1,644,691	+				+1.3
1,644,691	+				+1.1
1,644,692	-				+0.8
1,644,692	-				-0.1
1,644,692	-				+0.5
1,644,692	-				+0.6
1,644,789	-		Rru_A1393	0.29	+1.6
1,644,857	-		Rru_A1393	0.48	+1.9
1,644,994	+		Rru_A1393	0.87	+1.8
1,645,120	-				-0.1
1,645,269	+		Rru_A1394	0.14	+1.8
1,645,269	+		Rru_A1394	0.14	-0.1
1,645,269	+		Rru_A1394	0.14	+1.4
1,645,270	-		Rru_A1394	0.14	+2.1
1,645,282	-		Rru_A1394	0.15	+0.6
1,645,282	-		Rru_A1394	0.15	-0.1
1,645,282	-		Rru_A1394	0.15	+1.5
1,645,321	+		Rru_A1394	0.17	+0.5
1,645,323	+		Rru_A1394	0.17	+1.3
1,645,324	-		Rru_A1394	0.17	-0.1
1,645,324	-		Rru_A1394	0.17	+1.0
1,645,324	-		Rru_A1394	0.17	+1.0
1,645,357	-		Rru_A1394	0.20	-0.1
1,645,536	+		Rru_A1394	0.31	-0.1
1,645,537	-		Rru_A1394	0.31	+1.0
1,645,647	+		Rru_A1394	0.38	-0.2
1,645,648	-		Rru_A1394	0.38	-0.1
1,645,648	-		Rru_A1394	0.38	-0.1