Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1348

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,587,428	-				-1.1
1,587,540	+				+0.2
1,587,540	+				+2.8
1,587,629	+		Rru_A1347	0.13	+1.9
1,587,799	+		Rru_A1347	0.37	-0.1
1,587,808	+		Rru_A1347	0.38	+1.8
1,587,810	+		Rru_A1347	0.38	+0.9
1,587,810	+		Rru_A1347	0.38	+0.6
1,587,811	-		Rru_A1347	0.39	-1.1
1,587,811	-		Rru_A1347	0.39	-0.1
1,587,811	-		Rru_A1347	0.39	+0.8
1,587,906	+		Rru_A1347	0.52	-0.1
1,587,907	-		Rru_A1347	0.52	-0.1
1,587,907	-		Rru_A1347	0.52	-0.1
1,587,907	-		Rru_A1347	0.52	+1.0
1,587,907	-		Rru_A1347	0.52	+0.7
1,588,135	+		Rru_A1347	0.85	-0.1
1,588,136	-		Rru_A1347	0.85	-0.1
1,588,152	+		Rru_A1347	0.87	-0.1
1,588,153	-		Rru_A1347	0.87	+0.3
1,588,153	-		Rru_A1347	0.87	-0.1
1,588,153	-		Rru_A1347	0.87	+0.6
1,588,349	+				-0.1
1,588,627	+		Rru_A1348	0.35	+1.9
1,588,628	-		Rru_A1348	0.35	-1.1
1,588,990	-		Rru_A1348	0.78	-0.1
1,589,204	+				+2.3
1,589,209	+				+0.3
1,589,210	-				-0.1
1,589,639	+		Rru_A1349	0.26	-0.1
1,589,837	+		Rru_A1349	0.39	-1.1
1,589,838	-		Rru_A1349	0.39	+1.6
1,589,838	-		Rru_A1349	0.39	+0.8
1,589,838	-		Rru_A1349	0.39	+1.6
1,589,838	-		Rru_A1349	0.39	-0.1
1,589,871	-		Rru_A1349	0.41	+0.4
1,589,896	+		Rru_A1349	0.43	+0.6
1,589,936	+		Rru_A1349	0.45	-0.1
1,589,936	+		Rru_A1349	0.45	+1.3
1,589,960	+		Rru_A1349	0.47	+0.1
1,589,960	+		Rru_A1349	0.47	+1.7
1,589,960	+		Rru_A1349	0.47	-1.1
1,589,961	-		Rru_A1349	0.47	-0.1
1,589,961	-		Rru_A1349	0.47	+2.1
1,589,961	-		Rru_A1349	0.47	-0.1
1,589,961	-		Rru_A1349	0.47	+0.3
1,589,961	-		Rru_A1349	0.47	+1.4
1,590,028	+		Rru_A1349	0.51	+1.5
1,590,111	-		Rru_A1349	0.56	-0.1
1,590,113	+		Rru_A1349	0.56	+2.5
1,590,113	+		Rru_A1349	0.56	-1.1
1,590,114	-		Rru_A1349	0.56	+0.5