Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1346

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,584,835	+				-0.1
1,584,835	+				-0.3
1,584,835	+				+1.2
1,584,835	+				+0.9
1,584,836	-				-1.1
1,584,836	-				+0.7
1,584,836	-				-0.3
1,584,836	-				-0.6
1,584,836	-				+1.9
1,584,836	-				-0.1
1,585,025	+		Rru_A1345	0.23	+1.3
1,585,025	+		Rru_A1345	0.23	-0.1
1,585,025	+		Rru_A1345	0.23	-0.1
1,585,025	+		Rru_A1345	0.23	-0.1
1,585,025	+		Rru_A1345	0.23	-0.1
1,585,025	+		Rru_A1345	0.23	+1.4
1,585,026	-		Rru_A1345	0.23	+0.6
1,585,026	-		Rru_A1345	0.23	+3.1
1,585,026	-		Rru_A1345	0.23	+2.1
1,585,115	+		Rru_A1345	0.34	-0.1
1,585,115	+		Rru_A1345	0.34	+1.1
1,585,116	-		Rru_A1345	0.34	+1.7
1,585,190	+		Rru_A1345	0.42	+0.9
1,585,190	+		Rru_A1345	0.42	-0.1
1,585,191	-		Rru_A1345	0.43	-0.5
1,585,288	+		Rru_A1345	0.54	+1.3
1,585,288	+		Rru_A1345	0.54	+1.3
1,585,288	+		Rru_A1345	0.54	-0.1
1,585,288	+		Rru_A1345	0.54	+3.5
1,585,288	+		Rru_A1345	0.54	+1.2
1,585,288	+		Rru_A1345	0.54	-0.1
1,585,288	+		Rru_A1345	0.54	+1.1
1,585,288	+		Rru_A1345	0.54	+0.1
1,585,289	-		Rru_A1345	0.54	+2.9
1,585,289	-		Rru_A1345	0.54	+1.3
1,585,949	+		Rru_A1346	0.15	-1.1
1,585,949	+		Rru_A1346	0.15	-0.1
1,585,949	+		Rru_A1346	0.15	+1.7
1,585,949	+		Rru_A1346	0.15	+1.0
1,585,950	-		Rru_A1346	0.15	-2.1
1,585,950	-		Rru_A1346	0.15	-0.1
1,585,950	-		Rru_A1346	0.15	-0.1
1,586,081	+		Rru_A1346	0.24	-0.1
1,586,082	-		Rru_A1346	0.24	+0.3
1,586,082	-		Rru_A1346	0.24	+1.5
1,586,382	-		Rru_A1346	0.43	+0.8
1,586,717	+		Rru_A1346	0.64	-0.1
1,586,717	+		Rru_A1346	0.64	+1.5
1,586,717	+		Rru_A1346	0.64	-0.1
1,586,717	+		Rru_A1346	0.64	+1.9
1,586,717	+		Rru_A1346	0.64	-0.1
1,586,717	+		Rru_A1346	0.64	+0.7
1,586,718	-		Rru_A1346	0.64	+2.1
1,586,894	+		Rru_A1346	0.75	-0.1
1,586,894	+		Rru_A1346	0.75	+1.2
1,586,894	+		Rru_A1346	0.75	+0.8
1,586,895	-		Rru_A1346	0.75	-0.1
1,586,895	-		Rru_A1346	0.75	-0.1
1,586,895	-		Rru_A1346	0.75	+0.9
1,586,895	-		Rru_A1346	0.75	+1.2
1,587,287	+				+2.9
1,587,287	+				+1.3
1,587,287	+				+1.9
1,587,287	+				+1.4
1,587,287	+				+0.9
1,587,288	-				+1.3
1,587,288	-				+1.5
1,587,288	-				+0.4
1,587,288	-				+1.1
1,587,290	-				+1.4
1,587,428	-				-1.1
1,587,540	+				+0.2
1,587,540	+				+2.8
1,587,629	+		Rru_A1347	0.13	+1.9
1,587,799	+		Rru_A1347	0.37	-0.1
1,587,808	+		Rru_A1347	0.38	+1.8
1,587,810	+		Rru_A1347	0.38	+0.9
1,587,810	+		Rru_A1347	0.38	+0.6
1,587,811	-		Rru_A1347	0.39	-1.1
1,587,811	-		Rru_A1347	0.39	-0.1
1,587,811	-		Rru_A1347	0.39	+0.8
1,587,906	+		Rru_A1347	0.52	-0.1
1,587,907	-		Rru_A1347	0.52	-0.1
1,587,907	-		Rru_A1347	0.52	-0.1
1,587,907	-		Rru_A1347	0.52	+1.0
1,587,907	-		Rru_A1347	0.52	+0.7
1,588,135	+		Rru_A1347	0.85	-0.1
1,588,136	-		Rru_A1347	0.85	-0.1
1,588,152	+		Rru_A1347	0.87	-0.1
1,588,153	-		Rru_A1347	0.87	+0.3
1,588,153	-		Rru_A1347	0.87	-0.1
1,588,153	-		Rru_A1347	0.87	+0.6