Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1334

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,569,965	+		Rru_A1333	0.61	+1.3
1,569,968	-		Rru_A1333	0.62	-1.1
1,569,968	-		Rru_A1333	0.62	+0.7
1,570,153	-				-0.1
1,570,192	+				-0.1
1,570,356	+				-0.1
1,570,533	+		Rru_A1334	0.40	-0.1
1,570,533	+		Rru_A1334	0.40	+1.5
1,570,534	-		Rru_A1334	0.40	+1.6
1,570,534	-		Rru_A1334	0.40	+1.1
1,570,534	-		Rru_A1334	0.40	+0.5
1,570,574	-		Rru_A1334	0.49	-0.1
1,570,767	+				+1.5
1,570,768	-				+0.1
1,570,768	-				+0.7
1,570,911	+				+1.2
1,571,028	+				+3.3
1,571,029	-				-0.1
1,571,029	-				+1.1
1,571,109	+				+0.8
1,571,191	+				+5.0
1,571,191	+				-0.1
1,571,191	+				-1.1
1,571,192	-				-0.1
1,571,192	-				+1.1
1,571,192	-				+1.3
1,571,441	+				+2.3
1,571,441	+				+0.9
1,571,441	+				+0.7
1,571,441	+				+1.1
1,571,442	-				-0.1
1,571,442	-				-0.1
1,571,442	-				+1.4
1,571,445	+				-0.1
1,571,445	+				+0.5
1,571,445	+				+2.8
1,571,445	+				+2.1
1,571,446	-				-0.1
1,571,446	-				-0.1
1,571,447	+				+4.5
1,571,448	-				+2.8
1,571,448	-				+1.0
1,571,448	-				+1.3
1,571,633	+		Rru_A1335	0.26	+1.0
1,571,634	-		Rru_A1335	0.27	+2.1
1,571,634	-		Rru_A1335	0.27	+0.9
1,571,634	-		Rru_A1335	0.27	+1.2