Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1315

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,551,008	+		Rru_A1313	0.86	-0.3
1,551,010	+		Rru_A1313	0.86	+2.4
1,551,011	-		Rru_A1313	0.86	+0.9
1,551,011	-		Rru_A1313	0.86	-0.0
1,551,031	+		Rru_A1313	0.88	+0.6
1,551,032	-		Rru_A1313	0.88	+0.5
1,551,032	-		Rru_A1313	0.88	+0.7
1,551,032	-		Rru_A1313	0.88	+0.8
1,551,171	-				+0.4
1,551,176	+				+0.7
1,551,176	+				-0.2
1,551,176	+				-0.0
1,551,176	+				+1.3
1,551,501	-		Rru_A1314	0.28	-0.6
1,551,523	-		Rru_A1314	0.32	+1.4
1,551,523	-		Rru_A1314	0.32	+0.9
1,551,523	-		Rru_A1314	0.32	+1.3
1,551,524	+		Rru_A1314	0.32	-1.0
1,551,524	+		Rru_A1314	0.32	+0.8
1,551,525	-		Rru_A1314	0.32	-0.0
1,551,525	-		Rru_A1314	0.32	+0.8
1,551,525	-		Rru_A1314	0.32	+1.3
1,551,652	-		Rru_A1314	0.51	+2.4
1,551,735	-		Rru_A1314	0.64	+4.0
1,551,985	+				+0.2
1,552,095	+		Rru_A1315	0.37	-0.0
1,552,095	+		Rru_A1315	0.37	+0.2
1,552,095	+		Rru_A1315	0.37	+0.4
1,552,095	+		Rru_A1315	0.37	+0.7
1,552,095	+		Rru_A1315	0.37	-0.0
1,552,096	-		Rru_A1315	0.37	+1.3
1,552,096	-		Rru_A1315	0.37	+0.1
1,552,096	-		Rru_A1315	0.37	+0.8
1,552,096	-		Rru_A1315	0.37	+1.0
1,552,096	-		Rru_A1315	0.37	-1.0
1,552,315	+				+0.2
1,552,315	+				+0.6
1,552,316	-				+0.7
1,552,335	+				-0.0
1,552,337	+				-0.0
1,552,338	-				+3.3
1,552,342	+				-0.0
1,552,348	+				-0.0
1,552,379	+				-0.0
1,552,426	+				+0.8
1,552,456	-				-0.0
1,552,468	+				+1.3
1,552,534	+				-1.0
1,552,534	+				-0.0
1,552,535	-				-0.0
1,552,597	+				+1.8
1,552,597	+				+0.9
1,552,597	+				+1.0
1,552,597	+				+0.7
1,552,598	-				+2.8
1,552,598	-				+0.7
1,552,604	+				+2.3
1,552,843	+		Rru_A1316	0.15	+0.3
1,552,843	+		Rru_A1316	0.15	+1.7
1,552,843	+		Rru_A1316	0.15	+0.3
1,552,843	+		Rru_A1316	0.15	+0.1
1,552,844	-		Rru_A1316	0.15	-0.0
1,552,844	-		Rru_A1316	0.15	+2.4
1,552,844	-		Rru_A1316	0.15	-0.0
1,552,846	+		Rru_A1316	0.15	+0.8
1,552,847	-		Rru_A1316	0.15	-1.0
1,552,847	-		Rru_A1316	0.15	-0.0
1,552,847	-		Rru_A1316	0.15	+1.8
1,552,918	-		Rru_A1316	0.19	+1.7
1,553,074	+		Rru_A1316	0.29	+1.2
1,553,085	-		Rru_A1316	0.30	+2.1
1,553,085	-		Rru_A1316	0.30	+0.6
1,553,085	-		Rru_A1316	0.30	+1.0
1,553,155	+		Rru_A1316	0.34	+1.5
1,553,155	+		Rru_A1316	0.34	+1.4
1,553,155	+		Rru_A1316	0.34	+0.4
1,553,155	+		Rru_A1316	0.34	+1.1
1,553,155	+		Rru_A1316	0.34	+0.9
1,553,156	-		Rru_A1316	0.34	+1.6
1,553,156	-		Rru_A1316	0.34	+1.0
1,553,156	-		Rru_A1316	0.34	-0.0
1,553,156	-		Rru_A1316	0.34	+0.7
1,553,156	-		Rru_A1316	0.34	+1.2
1,553,195	-		Rru_A1316	0.36	-0.6
1,553,195	-		Rru_A1316	0.36	-0.0
1,553,195	-		Rru_A1316	0.36	-0.0
1,553,268	+		Rru_A1316	0.41	+0.6
1,553,268	+		Rru_A1316	0.41	-1.0