Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1312

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,547,458	-				-0.0
1,547,518	-				+2.0
1,547,518	-				-0.0
1,547,564	+				-1.0
1,547,564	+				-0.0
1,547,564	+				-1.4
1,547,564	+				+1.0
1,547,564	+				+0.2
1,547,564	+				+1.5
1,547,564	+				-1.0
1,547,565	-				-0.0
1,547,565	-				-0.0
1,547,769	-		Rru_A1311	0.46	+0.5
1,547,861	+		Rru_A1311	0.69	+0.4
1,547,989	-				+0.4
1,548,017	+				+1.2
1,548,265	-				+1.5
1,548,391	-		Rru_A1312	0.16	-0.0
1,548,426	+		Rru_A1312	0.18	+0.1
1,548,426	+		Rru_A1312	0.18	-0.0
1,548,474	+		Rru_A1312	0.21	+1.2
1,548,474	+		Rru_A1312	0.21	+0.8
1,548,474	+		Rru_A1312	0.21	-0.0
1,548,474	+		Rru_A1312	0.21	+1.4
1,548,474	+		Rru_A1312	0.21	+1.2
1,548,475	-		Rru_A1312	0.21	+1.3
1,548,475	-		Rru_A1312	0.21	-0.0
1,548,490	+		Rru_A1312	0.22	-0.0
1,548,492	+		Rru_A1312	0.22	+0.7
1,548,493	-		Rru_A1312	0.22	-0.0
1,548,856	-		Rru_A1312	0.44	+0.1
1,548,891	+		Rru_A1312	0.46	-0.0
1,548,891	+		Rru_A1312	0.46	+1.0
1,549,176	+		Rru_A1312	0.63	+0.2
1,549,176	+		Rru_A1312	0.63	+0.5
1,549,177	-		Rru_A1312	0.63	+0.3
1,549,177	-		Rru_A1312	0.63	+1.0
1,549,312	+		Rru_A1312	0.71	-0.0
1,549,312	+		Rru_A1312	0.71	-0.4
1,549,312	+		Rru_A1312	0.71	-1.4
1,549,410	+		Rru_A1312	0.77	-1.0
1,549,410	+		Rru_A1312	0.77	-0.0
1,549,411	-		Rru_A1312	0.77	+0.9
1,549,411	-		Rru_A1312	0.77	+0.7
1,549,488	+		Rru_A1312	0.81	+0.3
1,549,489	-		Rru_A1312	0.81	-0.0
1,549,489	-		Rru_A1312	0.81	-0.0
1,549,489	-		Rru_A1312	0.81	-0.0
1,549,536	+		Rru_A1312	0.84	-0.8
1,549,536	+		Rru_A1312	0.84	+0.9
1,549,537	-		Rru_A1312	0.84	-0.0
1,549,539	+		Rru_A1312	0.84	+1.4
1,549,539	+		Rru_A1312	0.84	-0.0
1,549,551	+		Rru_A1312	0.85	-0.2
1,549,551	+		Rru_A1312	0.85	+0.4
1,549,551	+		Rru_A1312	0.85	+0.1
1,549,552	-		Rru_A1312	0.85	-0.8
1,549,552	-		Rru_A1312	0.85	-0.0
1,549,552	-		Rru_A1312	0.85	-0.0
1,549,552	-		Rru_A1312	0.85	+2.8
1,549,552	-		Rru_A1312	0.85	-0.0
1,549,555	-		Rru_A1312	0.85	+1.5
1,549,555	-		Rru_A1312	0.85	-1.3
1,549,561	+		Rru_A1312	0.85	-0.0
1,549,561	+		Rru_A1312	0.85	-1.6
1,549,813	+				-0.9
1,549,945	+				+0.8
1,549,945	+				+0.5
1,549,946	-				+1.2
1,549,946	-				+2.6
1,549,946	-				+2.5
1,550,014	+				+1.0
1,550,014	+				-0.8
1,550,014	+				-0.0
1,550,015	-				-0.0
1,550,135	-		Rru_A1313	0.19	+1.1
1,550,135	-		Rru_A1313	0.19	+0.1
1,550,176	+		Rru_A1313	0.22	+0.7
1,550,176	+		Rru_A1313	0.22	-0.8
1,550,177	-		Rru_A1313	0.22	-0.0
1,550,434	+		Rru_A1313	0.42	+1.0
1,550,434	+		Rru_A1313	0.42	+0.8
1,550,434	+		Rru_A1313	0.42	+0.5
1,550,435	-		Rru_A1313	0.42	+0.8
1,550,476	+		Rru_A1313	0.45	+0.0
1,550,476	+		Rru_A1313	0.45	+0.5
1,550,689	+		Rru_A1313	0.61	+0.4
1,550,743	+		Rru_A1313	0.66	+0.3
1,550,768	-		Rru_A1313	0.68	+0.4