Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1311

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,547,100	-		Rru_A1310	0.62	-0.0
1,547,101	+		Rru_A1310	0.62	-0.5
1,547,101	+		Rru_A1310	0.62	+1.3
1,547,101	+		Rru_A1310	0.62	-0.0
1,547,102	-		Rru_A1310	0.62	-0.1
1,547,458	-				-0.0
1,547,518	-				+2.0
1,547,518	-				-0.0
1,547,564	+				-1.0
1,547,564	+				-0.0
1,547,564	+				-1.4
1,547,564	+				+1.0
1,547,564	+				+0.2
1,547,564	+				+1.5
1,547,564	+				-1.0
1,547,565	-				-0.0
1,547,565	-				-0.0
1,547,769	-		Rru_A1311	0.46	+0.5
1,547,861	+		Rru_A1311	0.69	+0.4
1,547,989	-				+0.4
1,548,017	+				+1.2
1,548,265	-				+1.5
1,548,391	-		Rru_A1312	0.16	-0.0
1,548,426	+		Rru_A1312	0.18	+0.1
1,548,426	+		Rru_A1312	0.18	-0.0
1,548,474	+		Rru_A1312	0.21	+1.2
1,548,474	+		Rru_A1312	0.21	+0.8
1,548,474	+		Rru_A1312	0.21	-0.0
1,548,474	+		Rru_A1312	0.21	+1.4
1,548,474	+		Rru_A1312	0.21	+1.2
1,548,475	-		Rru_A1312	0.21	+1.3
1,548,475	-		Rru_A1312	0.21	-0.0
1,548,490	+		Rru_A1312	0.22	-0.0
1,548,492	+		Rru_A1312	0.22	+0.7
1,548,493	-		Rru_A1312	0.22	-0.0
1,548,856	-		Rru_A1312	0.44	+0.1
1,548,891	+		Rru_A1312	0.46	-0.0
1,548,891	+		Rru_A1312	0.46	+1.0