Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1309

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,543,072	+		Rru_A1308	0.47	-1.0
1,543,091	-		Rru_A1308	0.48	-0.0
1,543,175	+		Rru_A1308	0.53	-0.0
1,543,397	+		Rru_A1308	0.65	-0.9
1,543,397	+		Rru_A1308	0.65	-0.0
1,543,397	+		Rru_A1308	0.65	-0.0
1,543,398	-		Rru_A1308	0.65	-1.0
1,543,454	+		Rru_A1308	0.68	-0.0
1,543,454	+		Rru_A1308	0.68	+0.3
1,543,454	+		Rru_A1308	0.68	-0.0
1,543,454	+		Rru_A1308	0.68	-0.0
1,543,455	-		Rru_A1308	0.69	-0.0
1,543,455	-		Rru_A1308	0.69	-0.4
1,543,455	-		Rru_A1308	0.69	-0.5
1,543,456	+		Rru_A1308	0.69	-0.0
1,543,457	-		Rru_A1308	0.69	-1.0
1,543,618	+		Rru_A1308	0.78	+0.5
1,543,618	+		Rru_A1308	0.78	-1.0
1,543,619	-		Rru_A1308	0.78	-2.0
1,543,619	-		Rru_A1308	0.78	-1.9
1,543,619	-		Rru_A1308	0.78	-0.0
1,543,619	-		Rru_A1308	0.78	-0.0
1,543,619	-		Rru_A1308	0.78	-0.5
1,543,643	-		Rru_A1308	0.79	-0.5
1,543,774	+		Rru_A1308	0.86	+0.5
1,543,775	-		Rru_A1308	0.86	-1.0
1,543,981	+				-0.0
1,543,981	+				-0.0
1,543,982	-				-0.0
1,544,052	+				-0.0
1,544,052	+				+0.8
1,544,052	+				-1.9
1,544,053	-				-0.0
1,544,053	-				-0.0
1,544,343	+		Rru_A1309	0.13	+1.8
1,544,344	-		Rru_A1309	0.13	-1.0
1,544,616	+		Rru_A1309	0.24	-0.0
1,544,616	+		Rru_A1309	0.24	-0.0
1,544,617	-		Rru_A1309	0.24	-0.0
1,544,617	-		Rru_A1309	0.24	-0.8
1,544,734	-		Rru_A1309	0.29	-0.0
1,544,845	+		Rru_A1309	0.34	-0.0
1,544,847	+		Rru_A1309	0.34	-0.0
1,544,848	-		Rru_A1309	0.34	-0.0
1,544,848	-		Rru_A1309	0.34	-0.0
1,544,848	-		Rru_A1309	0.34	-0.0
1,544,848	-		Rru_A1309	0.34	-0.0
1,544,848	-		Rru_A1309	0.34	-0.0
1,545,243	+		Rru_A1309	0.51	-0.7
1,545,313	-		Rru_A1309	0.54	-0.0
1,545,345	+		Rru_A1309	0.56	-0.7
1,545,501	+		Rru_A1309	0.62	-0.0
1,545,501	+		Rru_A1309	0.62	-0.0
1,545,502	-		Rru_A1309	0.62	-0.0
1,545,502	-		Rru_A1309	0.62	-0.0
1,545,550	+		Rru_A1309	0.64	-0.0
1,545,576	+		Rru_A1309	0.66	-0.0
1,545,576	+		Rru_A1309	0.66	-0.0
1,545,577	-		Rru_A1309	0.66	-0.0
1,545,577	-		Rru_A1309	0.66	-0.0
1,545,737	-		Rru_A1309	0.73	-0.0
1,545,737	-		Rru_A1309	0.73	-0.0
1,545,737	-		Rru_A1309	0.73	-0.9
1,545,814	+		Rru_A1309	0.76	-2.4
1,545,815	-		Rru_A1309	0.76	-0.0
1,545,922	-		Rru_A1309	0.80	-0.0
1,546,066	-		Rru_A1309	0.87	-0.0
1,546,132	+		Rru_A1309	0.90	-0.0
1,546,133	-		Rru_A1309	0.90	-0.5
1,546,133	-		Rru_A1309	0.90	-0.0
1,546,554	-		Rru_A1310	0.14	+1.0
1,546,563	-		Rru_A1310	0.15	-0.0
1,546,563	-		Rru_A1310	0.15	-0.0
1,546,563	-		Rru_A1310	0.15	-0.0
1,547,100	-		Rru_A1310	0.62	-0.0
1,547,101	+		Rru_A1310	0.62	-0.5
1,547,101	+		Rru_A1310	0.62	+1.3
1,547,101	+		Rru_A1310	0.62	-0.0
1,547,102	-		Rru_A1310	0.62	-0.1