Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1201

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,417,813	+				-1.0
1,417,813	+				+1.3
1,417,855	+				+0.9
1,417,855	+				-0.0
1,417,855	+				+1.1
1,417,855	+				+0.8
1,417,856	-				-0.0
1,417,856	-				-1.0
1,417,856	-				-1.0
1,417,856	-				+1.5
1,417,856	-				+0.9
1,417,856	-				+0.4
1,417,857	+				+1.2
1,417,858	-				-1.0
1,417,858	-				-1.6
1,417,872	+				+0.2
1,418,002	+		Rru_A1200	0.20	+0.5
1,418,002	+		Rru_A1200	0.20	+1.3
1,418,002	+		Rru_A1200	0.20	+1.3
1,418,003	-		Rru_A1200	0.20	+1.3
1,418,044	-		Rru_A1200	0.25	-0.0
1,418,310	+		Rru_A1200	0.54	-0.0
1,418,311	-		Rru_A1200	0.54	-0.0
1,418,832	+				+1.7
1,418,832	+				+0.7
1,418,832	+				-0.0
1,418,832	+				+0.9
1,418,832	+				-0.0
1,418,832	+				+1.5
1,418,833	-				+0.8
1,418,833	-				-0.0
1,418,833	-				+1.4
1,418,844	+		Rru_A1201	0.11	+0.6
1,419,102	+		Rru_A1201	0.35	+1.4
1,419,102	+		Rru_A1201	0.35	+0.6
1,419,102	+		Rru_A1201	0.35	+0.8
1,419,102	+		Rru_A1201	0.35	+0.6
1,419,102	+		Rru_A1201	0.35	+2.2
1,419,102	+		Rru_A1201	0.35	+1.9
1,419,103	-		Rru_A1201	0.35	+1.4
1,419,103	-		Rru_A1201	0.35	+1.4
1,419,165	-		Rru_A1201	0.41	+2.0
1,419,249	+		Rru_A1201	0.49	+0.6
1,419,250	-		Rru_A1201	0.49	-0.0
1,419,250	-		Rru_A1201	0.49	+0.6
1,419,279	+		Rru_A1201	0.52	+1.6
1,419,279	+		Rru_A1201	0.52	+1.6
1,419,321	+		Rru_A1201	0.56	+1.6
1,419,322	-		Rru_A1201	0.56	+1.3
1,419,380	+		Rru_A1201	0.61	-1.0
1,419,380	+		Rru_A1201	0.61	+1.4
1,419,380	+		Rru_A1201	0.61	-0.0
1,419,380	+		Rru_A1201	0.61	+1.1
1,419,380	+		Rru_A1201	0.61	-0.0
1,419,380	+		Rru_A1201	0.61	+1.4
1,419,380	+		Rru_A1201	0.61	-1.0
1,419,380	+		Rru_A1201	0.61	+1.3
1,419,380	+		Rru_A1201	0.61	+1.4
1,419,380	+		Rru_A1201	0.61	-0.0
1,419,380	+		Rru_A1201	0.61	+1.6
1,419,380	+		Rru_A1201	0.61	-0.0
1,419,381	-		Rru_A1201	0.61	-0.0
1,419,381	-		Rru_A1201	0.61	+0.9
1,419,381	-		Rru_A1201	0.61	-0.0
1,419,381	-		Rru_A1201	0.61	+1.2
1,419,381	-		Rru_A1201	0.61	+1.1
1,419,381	-		Rru_A1201	0.61	+2.4
1,419,381	-		Rru_A1201	0.61	+1.5
1,419,381	-		Rru_A1201	0.61	-1.0
1,419,432	+		Rru_A1201	0.66	+0.8
1,419,432	+		Rru_A1201	0.66	-0.0
1,419,432	+		Rru_A1201	0.66	-0.0
1,419,432	+		Rru_A1201	0.66	+1.5
1,419,432	+		Rru_A1201	0.66	-0.0
1,419,433	-		Rru_A1201	0.66	-0.0
1,419,471	+		Rru_A1201	0.70	+2.1
1,419,471	+		Rru_A1201	0.70	+2.8
1,419,756	+				+1.7
1,419,801	+				+1.0
1,419,801	+				+1.0
1,419,802	-				-0.0
1,419,802	-				+1.3
1,419,922	+				+0.1
1,419,922	+				-0.0