Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1138

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,342,177	+		Rru_A1137	0.17	+2.0
1,342,202	+		Rru_A1137	0.19	-0.0
1,342,202	+		Rru_A1137	0.19	+1.8
1,342,304	+		Rru_A1137	0.29	+1.7
1,342,304	+		Rru_A1137	0.29	-0.0
1,342,304	+		Rru_A1137	0.29	-0.0
1,342,304	+		Rru_A1137	0.29	+1.2
1,342,304	+		Rru_A1137	0.29	-0.0
1,342,304	+		Rru_A1137	0.29	+1.1
1,342,305	-		Rru_A1137	0.29	+0.6
1,342,305	-		Rru_A1137	0.29	+1.7
1,342,305	-		Rru_A1137	0.29	-1.0
1,342,305	-		Rru_A1137	0.29	-0.0
1,342,305	-		Rru_A1137	0.29	-0.0
1,342,305	-		Rru_A1137	0.29	-0.0
1,342,305	-		Rru_A1137	0.29	-0.0
1,342,305	-		Rru_A1137	0.29	-0.0
1,342,305	-		Rru_A1137	0.29	-0.0
1,342,306	+		Rru_A1137	0.29	+1.0
1,342,306	+		Rru_A1137	0.29	+2.0
1,342,307	-		Rru_A1137	0.29	+0.9
1,342,307	-		Rru_A1137	0.29	+2.1
1,342,307	-		Rru_A1137	0.29	+0.4
1,342,664	+		Rru_A1137	0.64	+1.6
1,342,665	-		Rru_A1137	0.64	+1.7
1,342,739	+		Rru_A1137	0.71	-0.0
1,342,739	+		Rru_A1137	0.71	+1.5
1,342,739	+		Rru_A1137	0.71	-0.0
1,342,740	-		Rru_A1137	0.72	-0.0
1,342,740	-		Rru_A1137	0.72	-0.0
1,342,741	+		Rru_A1137	0.72	+1.8
1,342,741	+		Rru_A1137	0.72	+2.2
1,342,741	+		Rru_A1137	0.72	+1.5
1,342,741	+		Rru_A1137	0.72	-0.0
1,342,741	+		Rru_A1137	0.72	+1.4
1,342,741	+		Rru_A1137	0.72	+2.1
1,342,741	+		Rru_A1137	0.72	+1.8
1,342,742	-		Rru_A1137	0.72	+0.2
1,342,742	-		Rru_A1137	0.72	+1.2
1,342,742	-		Rru_A1137	0.72	+0.4
1,342,742	-		Rru_A1137	0.72	+1.0
1,343,352	+		Rru_A1138	0.40	-0.0
1,343,352	+		Rru_A1138	0.40	-0.0
1,343,352	+		Rru_A1138	0.40	-0.0
1,343,353	-		Rru_A1138	0.40	+0.0
1,343,353	-		Rru_A1138	0.40	+0.6
1,343,353	-		Rru_A1138	0.40	-0.0
1,343,777	-				+0.6
1,343,777	-				+2.1
1,343,915	+		Rru_A1139	0.20	+1.0
1,343,915	+		Rru_A1139	0.20	+1.7
1,343,957	+		Rru_A1139	0.29	-0.2
1,343,958	-		Rru_A1139	0.29	-0.0
1,344,111	+		Rru_A1139	0.63	-0.0
1,344,111	+		Rru_A1139	0.63	+0.4
1,344,111	+		Rru_A1139	0.63	+1.0
1,344,111	+		Rru_A1139	0.63	-1.0
1,344,112	-		Rru_A1139	0.63	-0.0
1,344,112	-		Rru_A1139	0.63	-0.0
1,344,112	-		Rru_A1139	0.63	+1.4
1,344,112	-		Rru_A1139	0.63	+1.2
1,344,112	-		Rru_A1139	0.63	+1.1
1,344,112	-		Rru_A1139	0.63	-1.0
1,344,310	+				+0.6
1,344,310	+				+1.0
1,344,329	-				+0.0
1,344,343	+				-0.0
1,344,344	-				-1.6
1,344,344	-				+0.4
1,344,500	+				+1.0
1,344,500	+				-0.0
1,344,501	-				+1.9
1,344,700	+				+1.0
1,344,701	-				+1.7
1,344,786	+				+1.3
1,344,787	-				+1.3