Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1128

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,328,676	+				+1.1
1,328,758	+				-0.0
1,328,777	+				+1.1
1,328,901	+				-0.0
1,328,901	+				-0.0
1,328,964	+				-0.0
1,328,965	-				+1.4
1,328,979	+				+2.4
1,328,998	+				+0.6
1,329,083	-				+1.3
1,329,098	+				+2.7
1,329,099	-				+2.6
1,329,099	-				+0.5
1,329,203	-				+3.0
1,329,215	+				+1.0
1,329,215	+				-0.0
1,329,216	-				-0.0
1,329,253	+				+1.1
1,329,253	+				-0.0
1,329,253	+				+1.8
1,329,253	+				-0.0
1,329,253	+				-0.0
1,329,254	-				+2.4
1,329,254	-				-0.0
1,329,256	+				+2.1
1,329,257	-				+0.8
1,329,320	+				+1.2
1,329,320	+				-0.0
1,329,349	+				-1.0
1,329,349	+				-0.0
1,329,350	-				-0.0
1,329,369	-				+1.3
1,329,387	+				+0.1
1,329,388	-				-1.0
1,329,401	+				+1.0
1,329,401	+				+1.1
1,329,511	+				-0.0
1,329,511	+				+1.8
1,329,512	-				-0.0
1,329,630	-				-0.8
1,329,640	+				+1.6
1,329,641	-				-0.0
1,329,754	+		Rru_A1128	0.17	-0.0
1,329,755	-		Rru_A1128	0.17	-0.0
1,329,755	-		Rru_A1128	0.17	-0.0
1,329,755	-		Rru_A1128	0.17	+1.4
1,329,755	-		Rru_A1128	0.17	-0.0
1,329,858	+		Rru_A1128	0.29	+0.9
1,329,858	+		Rru_A1128	0.29	-0.0
1,329,859	-		Rru_A1128	0.29	-0.0
1,329,878	+		Rru_A1128	0.31	-0.0
1,329,887	-		Rru_A1128	0.32	-0.5
1,329,965	+		Rru_A1128	0.42	+1.5
1,329,965	+		Rru_A1128	0.42	-0.0
1,329,965	+		Rru_A1128	0.42	+0.7
1,329,965	+		Rru_A1128	0.42	+0.8
1,329,965	+		Rru_A1128	0.42	-0.0
1,329,966	-		Rru_A1128	0.42	+2.0
1,329,966	-		Rru_A1128	0.42	+1.1
1,329,966	-		Rru_A1128	0.42	-0.0
1,329,966	-		Rru_A1128	0.42	-0.0
1,329,966	-		Rru_A1128	0.42	+0.8
1,330,041	-		Rru_A1128	0.51	+0.7
1,330,072	+		Rru_A1128	0.54	+0.1
1,330,089	+		Rru_A1128	0.56	+0.8
1,330,089	+		Rru_A1128	0.56	+0.9
1,330,090	-		Rru_A1128	0.56	+1.0
1,330,090	-		Rru_A1128	0.56	-0.1
1,330,135	+		Rru_A1128	0.62	+0.8
1,330,135	+		Rru_A1128	0.62	+0.2
1,330,135	+		Rru_A1128	0.62	+1.4
1,330,135	+		Rru_A1128	0.62	-0.0
1,330,135	+		Rru_A1128	0.62	+0.3
1,330,136	-		Rru_A1128	0.62	+1.0
1,330,136	-		Rru_A1128	0.62	-0.0
1,330,260	-		Rru_A1128	0.77	+0.9
1,330,260	-		Rru_A1128	0.77	-0.0
1,330,265	+		Rru_A1128	0.77	+1.3
1,330,265	+		Rru_A1128	0.77	+0.7
1,330,265	+		Rru_A1128	0.77	-0.0
1,330,265	+		Rru_A1128	0.77	+1.6
1,330,266	-		Rru_A1128	0.77	+1.3
1,330,266	-		Rru_A1128	0.77	+0.6
1,330,317	-		Rru_A1128	0.83	-0.0
1,330,317	-		Rru_A1128	0.83	-0.0
1,330,515	-				-0.0
1,330,616	+				+1.0
1,330,616	+				+0.6
1,330,617	-				-1.0
1,330,617	-				-0.0
1,330,617	-				+1.1
1,330,808	+		Rru_A1129	0.23	+0.5
1,331,142	+		Rru_A1129	0.49	-0.0
1,331,143	-		Rru_A1129	0.49	+1.9
1,331,144	+		Rru_A1129	0.49	+1.1
1,331,144	+		Rru_A1129	0.49	-0.0
1,331,144	+		Rru_A1129	0.49	+1.2
1,331,144	+		Rru_A1129	0.49	+3.7
1,331,144	+		Rru_A1129	0.49	-1.0
1,331,145	-		Rru_A1129	0.49	-0.0
1,331,145	-		Rru_A1129	0.49	+0.3
1,331,249	+		Rru_A1129	0.57	-0.0
1,331,315	+		Rru_A1129	0.62	-1.6
1,331,316	-		Rru_A1129	0.62	+2.3