Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1124

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,324,162	+		Rru_A1122	0.63	+0.6
1,324,163	-		Rru_A1122	0.64	+1.0
1,324,163	-		Rru_A1122	0.64	+0.3
1,324,163	-		Rru_A1122	0.64	+0.7
1,324,242	-		Rru_A1122	0.72	+0.9
1,324,353	+		Rru_A1122	0.83	+0.3
1,324,662	+		Rru_A1123	0.17	-0.0
1,324,662	+		Rru_A1123	0.17	+1.1
1,324,748	+		Rru_A1123	0.33	+1.4
1,324,748	+		Rru_A1123	0.33	+1.2
1,324,748	+		Rru_A1123	0.33	+0.9
1,324,748	+		Rru_A1123	0.33	+0.9
1,324,769	-		Rru_A1123	0.37	+2.0
1,324,769	-		Rru_A1123	0.37	-1.0
1,324,906	-		Rru_A1123	0.64	+0.5
1,324,966	+		Rru_A1123	0.76	-0.0
1,324,966	+		Rru_A1123	0.76	+1.0
1,324,967	-		Rru_A1123	0.76	+1.3
1,324,967	-		Rru_A1123	0.76	+1.0
1,325,296	+		Rru_A1124	0.13	-0.0
1,325,297	-		Rru_A1124	0.13	-0.2
1,325,297	-		Rru_A1124	0.13	+1.9
1,325,297	-		Rru_A1124	0.13	-1.0
1,325,297	-		Rru_A1124	0.13	+1.8
1,325,297	-		Rru_A1124	0.13	+0.3
1,325,297	-		Rru_A1124	0.13	-0.0
1,325,382	+		Rru_A1124	0.19	+1.4
1,325,430	+		Rru_A1124	0.22	-0.4
1,325,756	-		Rru_A1124	0.45	+1.5
1,325,756	-		Rru_A1124	0.45	+0.4
1,325,756	-		Rru_A1124	0.45	-0.0
1,325,978	-		Rru_A1124	0.60	+1.3
1,325,993	-		Rru_A1124	0.61	+1.0
1,325,993	-		Rru_A1124	0.61	-0.0
1,326,163	+		Rru_A1124	0.72	+0.2
1,326,163	+		Rru_A1124	0.72	+0.9
1,326,164	-		Rru_A1124	0.72	+2.4
1,326,201	+		Rru_A1124	0.75	+1.4
1,326,201	+		Rru_A1124	0.75	+1.1
1,326,202	-		Rru_A1124	0.75	+0.6
1,326,605	+				+1.6
1,326,606	-				-0.0
1,326,606	-				+0.7
1,326,606	-				+2.0
1,326,615	-				+0.3
1,326,641	+				-0.0
1,326,641	+				+2.7
1,326,658	+				+2.2
1,326,658	+				+1.6
1,326,658	+				+1.8
1,326,659	-				+2.2
1,326,659	-				-0.0
1,326,659	-				-1.3
1,326,760	-		Rru_A1125	0.34	-0.0
1,327,046	+				+1.1
1,327,071	+				-0.0
1,327,222	+				-0.0
1,327,340	+				+1.1
1,327,340	+				+0.7
1,327,341	-				+1.5
1,327,387	-				-0.0
1,327,404	+				-0.0
1,327,404	+				-0.0
1,327,404	+				-0.0
1,327,404	+				+1.7
1,327,405	-				-0.0
1,327,405	-				-0.2
1,327,405	-				+0.8
1,327,405	-				-0.0
1,327,412	+				-0.0
1,327,412	+				-0.0
1,327,413	-				+0.6
1,327,500	+				+0.7
1,327,515	+				+1.7
1,327,515	+				-0.0
1,327,516	-				-0.0
1,327,516	-				-0.0
1,327,516	-				-0.0