Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1079

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,270,153	-		Rru_A1078	0.76	+2.3
1,270,769	+		Rru_A1079	0.19	-0.0
1,270,769	+		Rru_A1079	0.19	-1.6
1,270,770	-		Rru_A1079	0.19	+0.9
1,270,770	-		Rru_A1079	0.19	-0.0
1,270,770	-		Rru_A1079	0.19	-0.0
1,270,770	-		Rru_A1079	0.19	+0.2
1,270,851	+		Rru_A1079	0.23	+0.3
1,270,851	+		Rru_A1079	0.23	+1.5
1,270,852	-		Rru_A1079	0.23	-1.0
1,270,852	-		Rru_A1079	0.23	+0.8
1,270,852	-		Rru_A1079	0.23	+1.1
1,270,852	-		Rru_A1079	0.23	+1.5
1,270,852	-		Rru_A1079	0.23	-0.0
1,270,853	+		Rru_A1079	0.23	+1.6
1,270,853	+		Rru_A1079	0.23	-1.0
1,270,853	+		Rru_A1079	0.23	+1.7
1,270,853	+		Rru_A1079	0.23	+1.0
1,270,853	+		Rru_A1079	0.23	+1.2
1,270,853	+		Rru_A1079	0.23	+2.0
1,270,853	+		Rru_A1079	0.23	+3.2
1,270,853	+		Rru_A1079	0.23	+1.0
1,270,853	+		Rru_A1079	0.23	+1.0
1,270,853	+		Rru_A1079	0.23	+1.6
1,270,853	+		Rru_A1079	0.23	+0.2
1,270,853	+		Rru_A1079	0.23	+0.9
1,270,853	+		Rru_A1079	0.23	+1.0
1,270,854	-		Rru_A1079	0.24	+1.8
1,270,854	-		Rru_A1079	0.24	+2.0
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,854	-		Rru_A1079	0.24	+1.4
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,854	-		Rru_A1079	0.24	+0.3
1,270,854	-		Rru_A1079	0.24	+0.6
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,854	-		Rru_A1079	0.24	+1.1
1,270,854	-		Rru_A1079	0.24	-0.0
1,270,989	-		Rru_A1079	0.31	+0.3
1,271,037	+		Rru_A1079	0.33	+0.9
1,271,038	-		Rru_A1079	0.34	+0.8
1,271,038	-		Rru_A1079	0.34	+1.2
1,271,038	-		Rru_A1079	0.34	+3.1
1,271,261	+		Rru_A1079	0.46	-0.0
1,271,262	-		Rru_A1079	0.46	+2.1
1,271,262	-		Rru_A1079	0.46	-0.0
1,271,492	+		Rru_A1079	0.58	+1.4
1,271,492	+		Rru_A1079	0.58	+1.5
1,271,492	+		Rru_A1079	0.58	+1.8
1,271,492	+		Rru_A1079	0.58	-0.0
1,271,493	-		Rru_A1079	0.58	+1.3
1,271,493	-		Rru_A1079	0.58	+2.0
1,271,493	-		Rru_A1079	0.58	-0.0
1,272,071	+		Rru_A1079	0.90	-0.0
1,272,072	-				-0.0
1,272,072	-				+1.6
1,272,084	+				-0.0
1,272,085	-				+0.9
1,272,255	+				+1.7
1,272,255	+				-0.0
1,272,255	+				-1.0
1,272,255	+				+1.3
1,272,256	-				+1.9
1,272,256	-				+0.9
1,272,256	-				+1.3
1,272,256	-				-1.6
1,272,256	-				-0.0
1,272,294	-				+1.0
1,272,368	+				+1.4
1,272,369	-				-1.6
1,272,419	+				-0.0
1,272,419	+				+0.6
1,272,419	+				+1.4
1,272,419	+				+2.3
1,272,419	+				+1.5
1,272,420	-				-0.0
1,272,420	-				-1.0
1,272,420	-				+0.6
1,272,429	-				+1.1
1,272,429	-				-0.0
1,272,430	+				-1.0
1,272,430	+				-0.0
1,272,430	+				+1.2
1,272,430	+				-0.0
1,272,431	-				+0.8
1,272,512	+				+0.0
1,272,512	+				-0.6
1,272,512	+				-1.0
1,272,512	+				+2.6
1,272,512	+				+1.4
1,272,512	+				+1.2
1,272,513	-				-0.0
1,272,513	-				-2.0
1,272,513	-				-0.0
1,272,522	-				-0.0
1,272,672	-				+1.3
1,272,686	+				+1.3
1,272,686	+				+0.9
1,272,687	-				+1.4