Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1057

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,250,306	+		Rru_A1056	0.47	+0.1
1,250,306	+		Rru_A1056	0.47	-0.6
1,250,307	-		Rru_A1056	0.47	+1.5
1,250,307	-		Rru_A1056	0.47	-0.0
1,250,307	-		Rru_A1056	0.47	+0.6
1,250,307	-		Rru_A1056	0.47	+1.3
1,250,433	+		Rru_A1056	0.60	+1.2
1,250,433	+		Rru_A1056	0.60	-0.0
1,250,519	+		Rru_A1056	0.68	-0.0
1,250,520	-		Rru_A1056	0.69	-0.0
1,250,520	-		Rru_A1056	0.69	-0.0
1,250,660	+		Rru_A1056	0.82	-0.0
1,250,660	+		Rru_A1056	0.82	+1.1
1,250,924	+				+1.2
1,250,924	+				+0.8
1,250,924	+				-1.5
1,250,924	+				+1.0
1,250,925	-				+0.5
1,250,925	-				-0.0
1,250,925	-				+0.4
1,250,925	-				+0.8
1,250,925	-				+0.6
1,251,068	+				+0.4
1,251,068	+				-0.0
1,251,068	+				+0.4
1,251,069	-				+1.2
1,251,069	-				-0.0
1,251,070	+				+1.0
1,251,070	+				+0.2
1,251,070	+				+1.6
1,251,070	+				+0.7
1,251,070	+				+1.2
1,251,071	-				+2.7
1,251,071	-				-1.9
1,251,071	-				+2.1
1,251,210	-				-0.0
1,251,479	+		Rru_A1057	0.27	-0.9
1,251,528	+		Rru_A1057	0.34	+1.0
1,251,528	+		Rru_A1057	0.34	-0.0
1,251,546	+		Rru_A1057	0.36	+1.0
1,251,546	+		Rru_A1057	0.36	-0.0
1,251,547	-		Rru_A1057	0.36	-0.0
1,251,547	-		Rru_A1057	0.36	-0.0
1,251,585	+		Rru_A1057	0.41	+0.5
1,251,586	-		Rru_A1057	0.41	+0.6
1,251,586	-		Rru_A1057	0.41	-0.0
1,251,724	+		Rru_A1057	0.59	+0.7
1,251,724	+		Rru_A1057	0.59	-0.0
1,251,724	+		Rru_A1057	0.59	-0.0
1,251,725	-		Rru_A1057	0.59	+0.4
1,251,725	-		Rru_A1057	0.59	+1.1
1,251,725	-		Rru_A1057	0.59	+0.8
1,251,725	-		Rru_A1057	0.59	-0.0
1,251,725	-		Rru_A1057	0.59	-0.0
1,251,970	+				-0.0
1,251,970	+				+1.1
1,251,970	+				-0.6
1,251,970	+				+1.3
1,251,971	-				-1.0
1,252,149	+		Rru_A1058	0.21	-0.0
1,252,150	-		Rru_A1058	0.21	-0.0
1,252,162	+		Rru_A1058	0.24	+1.4
1,252,363	+		Rru_A1058	0.68	-0.0
1,252,363	+		Rru_A1058	0.68	-0.5
1,252,364	-		Rru_A1058	0.68	+0.2
1,252,364	-		Rru_A1058	0.68	+0.6
1,252,364	-		Rru_A1058	0.68	-0.0
1,252,392	+		Rru_A1058	0.74	-0.0
1,252,507	+				-0.0
1,252,515	-				+1.0
1,252,545	+				+1.0
1,252,548	-				+0.5
1,252,548	-				+0.9
1,252,548	-				-0.0
1,252,890	+		Rru_A1059	0.38	+1.2
1,252,891	-		Rru_A1059	0.38	+1.1
1,252,892	+		Rru_A1059	0.39	-0.0
1,252,892	+		Rru_A1059	0.39	+1.2
1,252,892	+		Rru_A1059	0.39	-0.0
1,252,893	-		Rru_A1059	0.39	-0.0
1,252,968	-		Rru_A1059	0.46	+1.4
1,252,968	-		Rru_A1059	0.46	-0.0