Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1056

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,248,883	+				+2.2
1,248,883	+				+0.9
1,248,884	-				-0.6
1,249,009	+				-0.0
1,249,010	-				-0.0
1,249,010	-				-0.0
1,249,010	-				-0.0
1,249,041	-		Rru_A1055	0.11	+2.0
1,249,042	+		Rru_A1055	0.11	+0.8
1,249,042	+		Rru_A1055	0.11	-0.1
1,249,313	-		Rru_A1055	0.55	-0.0
1,249,784	-				-0.0
1,249,784	-				-0.0
1,249,784	-				-1.0
1,249,784	-				+2.3
1,249,784	-				+1.1
1,250,148	+		Rru_A1056	0.32	+0.9
1,250,149	-		Rru_A1056	0.32	-0.0
1,250,151	-		Rru_A1056	0.32	+1.2
1,250,151	-		Rru_A1056	0.32	+0.7
1,250,222	+		Rru_A1056	0.39	-0.0
1,250,223	-		Rru_A1056	0.39	+0.7
1,250,237	+		Rru_A1056	0.40	-0.0
1,250,238	-		Rru_A1056	0.40	-0.0
1,250,306	+		Rru_A1056	0.47	+0.1
1,250,306	+		Rru_A1056	0.47	-0.6
1,250,307	-		Rru_A1056	0.47	+1.5
1,250,307	-		Rru_A1056	0.47	-0.0
1,250,307	-		Rru_A1056	0.47	+0.6
1,250,307	-		Rru_A1056	0.47	+1.3
1,250,433	+		Rru_A1056	0.60	+1.2
1,250,433	+		Rru_A1056	0.60	-0.0
1,250,519	+		Rru_A1056	0.68	-0.0
1,250,520	-		Rru_A1056	0.69	-0.0
1,250,520	-		Rru_A1056	0.69	-0.0
1,250,660	+		Rru_A1056	0.82	-0.0
1,250,660	+		Rru_A1056	0.82	+1.1
1,250,924	+				+1.2
1,250,924	+				+0.8
1,250,924	+				-1.5
1,250,924	+				+1.0
1,250,925	-				+0.5
1,250,925	-				-0.0
1,250,925	-				+0.4
1,250,925	-				+0.8
1,250,925	-				+0.6
1,251,068	+				+0.4
1,251,068	+				-0.0
1,251,068	+				+0.4
1,251,069	-				+1.2
1,251,069	-				-0.0
1,251,070	+				+1.0
1,251,070	+				+0.2
1,251,070	+				+1.6
1,251,070	+				+0.7
1,251,070	+				+1.2
1,251,071	-				+2.7
1,251,071	-				-1.9
1,251,071	-				+2.1
1,251,210	-				-0.0
1,251,479	+		Rru_A1057	0.27	-0.9
1,251,528	+		Rru_A1057	0.34	+1.0
1,251,528	+		Rru_A1057	0.34	-0.0
1,251,546	+		Rru_A1057	0.36	+1.0
1,251,546	+		Rru_A1057	0.36	-0.0
1,251,547	-		Rru_A1057	0.36	-0.0
1,251,547	-		Rru_A1057	0.36	-0.0
1,251,585	+		Rru_A1057	0.41	+0.5
1,251,586	-		Rru_A1057	0.41	+0.6
1,251,586	-		Rru_A1057	0.41	-0.0
1,251,724	+		Rru_A1057	0.59	+0.7
1,251,724	+		Rru_A1057	0.59	-0.0
1,251,724	+		Rru_A1057	0.59	-0.0
1,251,725	-		Rru_A1057	0.59	+0.4
1,251,725	-		Rru_A1057	0.59	+1.1
1,251,725	-		Rru_A1057	0.59	+0.8
1,251,725	-		Rru_A1057	0.59	-0.0
1,251,725	-		Rru_A1057	0.59	-0.0