Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1039

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,231,012	+		Rru_A1038	0.19	+1.1
1,231,013	-		Rru_A1038	0.19	-0.0
1,231,204	+		Rru_A1038	0.38	+1.7
1,231,205	-		Rru_A1038	0.38	-0.0
1,231,481	-		Rru_A1038	0.65	-0.4
1,231,481	-		Rru_A1038	0.65	+0.8
1,231,519	+		Rru_A1038	0.68	+1.4
1,231,519	+		Rru_A1038	0.68	+1.2
1,231,520	-		Rru_A1038	0.69	+1.2
1,231,560	-		Rru_A1038	0.72	-0.0
1,231,769	+				+1.4
1,231,769	+				-0.0
1,231,833	+				+1.6
1,231,838	+				-0.0
1,231,838	+				-0.0
1,231,838	+				+1.0
1,231,838	+				-0.0
1,231,838	+				-0.0
1,231,838	+				+2.9
1,231,838	+				-0.0
1,231,838	+				+1.6
1,231,839	-				+1.1
1,231,839	-				+0.2
1,231,839	-				+1.5
1,231,877	+				+0.6
1,231,878	-				+1.8
1,231,956	+				-0.0
1,231,956	+				-0.0
1,231,957	-				+1.0
1,231,959	-				+0.7
1,232,010	+				+1.3
1,232,010	+				+1.2
1,232,219	-		Rru_A1039	0.23	+0.4
1,232,219	-		Rru_A1039	0.23	-0.1
1,232,219	-		Rru_A1039	0.23	-0.0
1,232,219	-		Rru_A1039	0.23	+2.1
1,232,362	+		Rru_A1039	0.39	-0.0
1,232,362	+		Rru_A1039	0.39	-0.0
1,232,362	+		Rru_A1039	0.39	-0.0
1,232,363	-		Rru_A1039	0.39	+1.6
1,232,936	+				+1.6
1,232,937	-				-0.0
1,232,957	+				+0.6
1,232,958	-				-0.0
1,232,958	-				+0.6
1,232,958	-				-0.0
1,232,958	-				+2.4
1,233,006	-				+1.9
1,233,296	+		Rru_A1040	0.22	+0.9
1,233,308	+		Rru_A1040	0.24	-0.0
1,233,308	+		Rru_A1040	0.24	-0.0
1,233,308	+		Rru_A1040	0.24	-0.0
1,233,308	+		Rru_A1040	0.24	+0.3
1,233,309	-		Rru_A1040	0.24	+0.5
1,233,309	-		Rru_A1040	0.24	-0.0
1,233,423	+		Rru_A1040	0.34	-0.0
1,233,424	-		Rru_A1040	0.34	-0.0
1,233,471	+		Rru_A1040	0.38	+0.4
1,233,472	-		Rru_A1040	0.38	+1.9
1,233,624	+		Rru_A1040	0.52	+2.0
1,233,699	+		Rru_A1040	0.59	+0.4
1,233,699	+		Rru_A1040	0.59	+1.7
1,233,700	-		Rru_A1040	0.59	-0.4
1,233,700	-		Rru_A1040	0.59	+3.7
1,233,701	+		Rru_A1040	0.59	+0.5
1,233,702	-		Rru_A1040	0.59	+0.5
1,233,702	-		Rru_A1040	0.59	-0.0