Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1036

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,227,987	+		Rru_A1035	0.70	-0.0
1,227,988	-		Rru_A1035	0.70	-1.0
1,228,029	-		Rru_A1035	0.71	-0.1
1,228,146	+		Rru_A1035	0.75	+1.3
1,228,146	+		Rru_A1035	0.75	+1.2
1,228,223	+		Rru_A1035	0.78	-0.2
1,228,223	+		Rru_A1035	0.78	+1.6
1,228,223	+		Rru_A1035	0.78	+1.3
1,228,224	-		Rru_A1035	0.78	+2.0
1,228,307	-		Rru_A1035	0.81	-0.0
1,228,662	+				+2.1
1,228,662	+				+3.4
1,228,662	+				-0.0
1,228,707	+				+0.1
1,228,708	-				+2.6
1,228,708	-				+2.6
1,228,708	-				-0.0
1,228,708	-				+0.6
1,228,708	-				+1.0
1,228,726	+				+1.1
1,228,726	+				+0.8
1,228,779	+				-0.0
1,228,780	-				-0.0
1,228,780	-				-0.0
1,228,824	+				-0.2
1,228,824	+				+0.6
1,228,896	-				+2.4
1,228,896	-				-1.6
1,228,898	-				-0.4
1,229,147	+		Rru_A1036	0.31	+1.0
1,229,147	+		Rru_A1036	0.31	-2.3
1,229,147	+		Rru_A1036	0.31	+0.8
1,229,147	+		Rru_A1036	0.31	+0.9
1,229,147	+		Rru_A1036	0.31	+2.9
1,229,147	+		Rru_A1036	0.31	+0.9
1,229,147	+		Rru_A1036	0.31	+1.0
1,229,148	-		Rru_A1036	0.31	-0.0
1,229,148	-		Rru_A1036	0.31	+1.3
1,229,148	-		Rru_A1036	0.31	-0.0
1,229,148	-		Rru_A1036	0.31	+0.6
1,229,148	-		Rru_A1036	0.31	+1.6
1,229,148	-		Rru_A1036	0.31	-1.2
1,229,148	-		Rru_A1036	0.31	+0.6
1,229,465	+		Rru_A1036	0.79	+0.5
1,229,465	+		Rru_A1036	0.79	-0.5
1,229,466	-		Rru_A1036	0.79	-0.4
1,229,852	-		Rru_A1037	0.20	+1.0
1,229,906	+		Rru_A1037	0.25	+2.7
1,229,906	+		Rru_A1037	0.25	+1.4
1,229,906	+		Rru_A1037	0.25	+1.4
1,229,907	-		Rru_A1037	0.25	+0.4
1,230,170	+		Rru_A1037	0.48	+0.8
1,230,170	+		Rru_A1037	0.48	+3.0
1,230,170	+		Rru_A1037	0.48	+0.2
1,230,170	+		Rru_A1037	0.48	+0.5
1,230,336	+		Rru_A1037	0.62	+0.9
1,230,590	+		Rru_A1037	0.84	+0.3
1,230,590	+		Rru_A1037	0.84	-0.0