Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1010

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,196,090	+		Rru_A1009	0.37	+0.1
1,196,090	+		Rru_A1009	0.37	+2.1
1,196,112	-		Rru_A1009	0.40	+1.7
1,196,121	+		Rru_A1009	0.41	-0.0
1,196,156	+		Rru_A1009	0.45	+1.3
1,196,156	+		Rru_A1009	0.45	-0.0
1,196,157	-		Rru_A1009	0.45	+1.0
1,196,245	-		Rru_A1009	0.55	+0.3
1,196,248	+		Rru_A1009	0.55	+0.5
1,196,249	-		Rru_A1009	0.55	-1.0
1,196,272	-		Rru_A1009	0.58	+1.2
1,196,303	+		Rru_A1009	0.61	-0.0
1,196,303	+		Rru_A1009	0.61	+1.0
1,196,303	+		Rru_A1009	0.61	+1.3
1,196,304	-		Rru_A1009	0.62	+0.8
1,196,388	+		Rru_A1009	0.71	+1.1
1,196,389	-		Rru_A1009	0.71	+0.5
1,196,389	-		Rru_A1009	0.71	+1.0
1,196,390	+		Rru_A1009	0.71	+1.2
1,196,390	+		Rru_A1009	0.71	+2.3
1,196,390	+		Rru_A1009	0.71	+2.2
1,196,390	+		Rru_A1009	0.71	-0.0
1,196,391	-		Rru_A1009	0.71	+1.0
1,196,391	-		Rru_A1009	0.71	-0.0
1,196,391	-		Rru_A1009	0.71	-0.0
1,196,391	-		Rru_A1009	0.71	+0.6
1,196,391	-		Rru_A1009	0.71	+0.6
1,196,391	-		Rru_A1009	0.71	+1.0
1,196,391	-		Rru_A1009	0.71	+0.6
1,196,394	+		Rru_A1009	0.72	-0.0
1,196,396	+		Rru_A1009	0.72	+1.0
1,196,396	+		Rru_A1009	0.72	-0.0
1,196,396	+		Rru_A1009	0.72	-0.0
1,196,396	+		Rru_A1009	0.72	+0.4
1,196,397	-		Rru_A1009	0.72	-0.2
1,197,027	-				-0.0
1,197,242	+		Rru_A1010	0.27	-0.0
1,197,243	-		Rru_A1010	0.27	+1.2
1,197,362	+		Rru_A1010	0.41	+2.3
1,197,362	+		Rru_A1010	0.41	-0.0
1,197,362	+		Rru_A1010	0.41	+0.4
1,197,362	+		Rru_A1010	0.41	-0.0
1,197,363	-		Rru_A1010	0.41	-0.0
1,197,363	-		Rru_A1010	0.41	-0.0
1,197,363	-		Rru_A1010	0.41	+0.9
1,197,363	-		Rru_A1010	0.41	+1.1
1,197,363	-		Rru_A1010	0.41	+1.6
1,197,363	-		Rru_A1010	0.41	+1.1
1,197,371	+		Rru_A1010	0.42	+1.3
1,197,372	-		Rru_A1010	0.42	-0.4
1,197,443	+		Rru_A1010	0.50	+1.5
1,197,443	+		Rru_A1010	0.50	+0.4
1,197,443	+		Rru_A1010	0.50	-0.0
1,197,444	-		Rru_A1010	0.50	+1.2
1,197,476	+		Rru_A1010	0.54	-0.0
1,197,476	+		Rru_A1010	0.54	+1.5
1,197,476	+		Rru_A1010	0.54	-0.0
1,197,477	-		Rru_A1010	0.54	+0.8
1,197,477	-		Rru_A1010	0.54	-0.0
1,197,512	+		Rru_A1010	0.58	+1.0
1,197,513	-		Rru_A1010	0.58	+1.0
1,197,571	+		Rru_A1010	0.64	-0.0
1,197,571	+		Rru_A1010	0.64	+3.1
1,197,572	-		Rru_A1010	0.65	-0.0
1,197,690	-		Rru_A1010	0.78	+0.4
1,197,690	-		Rru_A1010	0.78	+1.4
1,197,884	+				+1.6
1,197,884	+				-1.0
1,197,884	+				-0.0
1,197,885	-				+0.4
1,197,885	-				+0.9
1,197,985	+				+1.1
1,198,006	+				+0.2
1,198,006	+				+0.9
1,198,006	+				+3.3
1,198,007	-				+1.0
1,198,007	-				+0.4
1,198,007	-				+0.9
1,198,019	+				+0.7
1,198,019	+				-0.0
1,198,020	-				-0.0
1,198,206	-		Rru_A1011	0.14	+1.0
1,198,286	+		Rru_A1011	0.19	+2.2
1,198,287	-		Rru_A1011	0.19	+1.3
1,198,310	+		Rru_A1011	0.21	+1.1
1,198,311	-		Rru_A1011	0.21	+2.3
1,198,674	-		Rru_A1011	0.46	-0.0
1,198,674	-		Rru_A1011	0.46	-0.0
1,198,674	-		Rru_A1011	0.46	-0.0
1,198,697	+		Rru_A1011	0.47	-0.0
1,198,697	+		Rru_A1011	0.47	+1.1
1,198,698	-		Rru_A1011	0.47	+1.3
1,198,698	-		Rru_A1011	0.47	+1.6
1,198,853	+		Rru_A1011	0.58	+1.9
1,198,853	+		Rru_A1011	0.58	+1.2
1,198,853	+		Rru_A1011	0.58	-0.0
1,198,853	+		Rru_A1011	0.58	-1.7
1,198,853	+		Rru_A1011	0.58	-1.0
1,198,853	+		Rru_A1011	0.58	+1.0
1,198,854	-		Rru_A1011	0.58	+0.9
1,198,854	-		Rru_A1011	0.58	+1.6