Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0930

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,105,022	+				+1.6
1,105,022	+				-0.0
1,105,022	+				+1.0
1,105,022	+				+1.1
1,105,023	-				+0.4
1,105,218	+				+0.6
1,105,218	+				-1.0
1,105,218	+				-0.0
1,105,218	+				-0.0
1,105,218	+				-0.0
1,105,219	-				-0.0
1,105,219	-				+1.6
1,105,219	-				-1.0
1,105,219	-				+1.0
1,105,219	-				+0.7
1,105,223	-				-0.0
1,105,277	+				-0.0
1,105,339	+				-0.0
1,105,340	-				-0.0
1,105,440	+				-0.0
1,105,485	+		Rru_A0929	0.15	-0.0
1,105,485	+		Rru_A0929	0.15	-0.0
1,105,485	+		Rru_A0929	0.15	+1.0
1,105,486	-		Rru_A0929	0.15	+1.0
1,105,825	+				-0.0
1,105,825	+				+2.1
1,105,826	-				+0.9
1,105,826	-				+1.3
1,105,929	-				+1.2
1,106,355	+		Rru_A0930	0.29	-0.0
1,106,355	+		Rru_A0930	0.29	-0.0
1,106,355	+		Rru_A0930	0.29	+1.0
1,106,355	+		Rru_A0930	0.29	+1.9
1,106,355	+		Rru_A0930	0.29	-0.0
1,106,355	+		Rru_A0930	0.29	+0.4
1,106,439	+		Rru_A0930	0.36	-0.0
1,106,439	+		Rru_A0930	0.36	-0.0
1,106,439	+		Rru_A0930	0.36	+1.0
1,106,440	-		Rru_A0930	0.36	+1.0
1,106,440	-		Rru_A0930	0.36	+1.7
1,106,565	+		Rru_A0930	0.47	+1.5
1,106,565	+		Rru_A0930	0.47	-0.4
1,106,565	+		Rru_A0930	0.47	+2.5
1,106,566	-		Rru_A0930	0.47	+1.6
1,106,566	-		Rru_A0930	0.47	+1.5
1,106,566	-		Rru_A0930	0.47	-0.0
1,106,566	-		Rru_A0930	0.47	+0.9
1,106,566	-		Rru_A0930	0.47	+0.5
1,106,566	-		Rru_A0930	0.47	+2.0
1,106,566	-		Rru_A0930	0.47	+1.4
1,106,814	+		Rru_A0930	0.69	+1.8
1,106,815	-		Rru_A0930	0.69	+0.7
1,106,815	-		Rru_A0930	0.69	+2.2
1,107,227	+				-1.0
1,107,227	+				+2.1
1,107,254	+				-0.0
1,107,255	-				-0.0
1,107,255	-				+0.3
1,107,255	-				+1.7
1,107,285	-				-0.0
1,107,336	-				+0.9
1,107,371	+				+0.9
1,107,371	+				-0.0
1,107,372	-				-0.0
1,107,372	-				-0.3
1,107,372	-				+0.9
1,107,465	-		Rru_A0931	0.16	-0.0
1,107,596	+		Rru_A0931	0.24	+3.4
1,107,596	+		Rru_A0931	0.24	+0.9
1,107,596	+		Rru_A0931	0.24	-0.0
1,107,596	+		Rru_A0931	0.24	+0.4
1,107,597	-		Rru_A0931	0.24	+1.0
1,107,597	-		Rru_A0931	0.24	-0.0
1,107,597	-		Rru_A0931	0.24	-0.0
1,107,599	+		Rru_A0931	0.25	+1.8
1,107,683	+		Rru_A0931	0.30	-0.0
1,107,683	+		Rru_A0931	0.30	+0.6
1,107,683	+		Rru_A0931	0.30	+1.5
1,107,683	+		Rru_A0931	0.30	-0.0
1,107,684	-		Rru_A0931	0.30	+0.9
1,107,684	-		Rru_A0931	0.30	+1.6
1,107,684	-		Rru_A0931	0.30	-0.0
1,107,806	+		Rru_A0931	0.38	+0.7
1,107,807	-		Rru_A0931	0.38	+0.4
1,107,807	-		Rru_A0931	0.38	-0.0
1,107,807	-		Rru_A0931	0.38	-0.0
1,107,995	+		Rru_A0931	0.51	-0.0
1,107,995	+		Rru_A0931	0.51	+0.5
1,107,995	+		Rru_A0931	0.51	+0.3