Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0916

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,088,852	+		Rru_A0914	0.76	+0.6
1,088,853	-		Rru_A0914	0.76	+0.4
1,088,853	-		Rru_A0914	0.76	+0.8
1,089,094	-				-0.0
1,089,094	-				-0.0
1,089,123	+				+1.0
1,089,125	+				+0.9
1,089,125	+				+1.7
1,089,126	-				-0.0
1,089,307	-				+1.2
1,089,557	+		Rru_A0915	0.48	+1.3
1,089,557	+		Rru_A0915	0.48	-0.0
1,089,557	+		Rru_A0915	0.48	-0.0
1,089,557	+		Rru_A0915	0.48	-0.0
1,089,558	-		Rru_A0915	0.48	+0.8
1,089,558	-		Rru_A0915	0.48	-0.0
1,089,558	-		Rru_A0915	0.48	+1.0
1,089,768	+				+2.3
1,089,769	-				-0.0
1,089,792	+				+0.8
1,089,793	-				+1.4
1,089,829	-				-1.0
1,089,829	-				-0.0
1,089,943	-		Rru_A0916	0.18	+0.8
1,089,978	-		Rru_A0916	0.22	+1.2
1,090,155	+		Rru_A0916	0.41	+1.6
1,090,540	+		Rru_A0916	0.83	+1.8
1,090,701	+				+1.4
1,090,701	+				+1.5
1,090,702	-				-0.0
1,090,756	-				-0.0
1,090,756	-				+0.6
1,090,756	-				-0.0
1,090,778	+				+0.5
1,090,915	+		Rru_A0917	0.15	+1.3
1,090,915	+		Rru_A0917	0.15	+1.1
1,090,915	+		Rru_A0917	0.15	-0.0
1,090,970	+		Rru_A0917	0.19	+1.0
1,090,977	+		Rru_A0917	0.20	-0.0
1,091,109	+		Rru_A0917	0.32	+2.3
1,091,141	+		Rru_A0917	0.34	+2.5
1,091,141	+		Rru_A0917	0.34	+1.0
1,091,256	+		Rru_A0917	0.44	-0.0
1,091,256	+		Rru_A0917	0.44	-1.0
1,091,367	+		Rru_A0917	0.54	-0.0
1,091,480	-		Rru_A0917	0.64	-0.0
1,091,480	-		Rru_A0917	0.64	+1.2
1,091,480	-		Rru_A0917	0.64	-0.0
1,091,490	-		Rru_A0917	0.65	-0.4
1,091,493	+		Rru_A0917	0.65	+1.0
1,091,494	-		Rru_A0917	0.65	+0.9
1,091,568	+		Rru_A0917	0.71	-0.0
1,091,569	-		Rru_A0917	0.71	-0.0
1,091,569	-		Rru_A0917	0.71	+1.5
1,091,570	+		Rru_A0917	0.72	+2.8
1,091,571	-		Rru_A0917	0.72	-0.0
1,091,571	-		Rru_A0917	0.72	+2.9
1,091,571	-		Rru_A0917	0.72	-1.0
1,091,571	-		Rru_A0917	0.72	+0.2
1,091,640	+		Rru_A0917	0.78	+0.5
1,091,640	+		Rru_A0917	0.78	+1.3
1,091,641	-		Rru_A0917	0.78	+2.0
1,091,641	-		Rru_A0917	0.78	+0.8