Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0884

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,056,516	-				+1.0
1,056,561	+				-0.0
1,056,561	+				-0.0
1,056,561	+				-0.0
1,056,562	-				-0.0
1,056,562	-				+0.8
1,056,562	-				+1.8
1,056,739	+				-0.0
1,056,740	-				-0.0
1,056,744	+				-0.0
1,056,744	+				+0.7
1,056,744	+				+1.8
1,056,745	-				+0.7
1,056,745	-				+0.5
1,056,754	+				+0.2
1,056,755	-				+1.0
1,056,755	-				+1.1
1,056,802	+				-0.0
1,056,802	+				+2.0
1,056,802	+				-0.6
1,056,802	+				+0.6
1,056,802	+				+0.4
1,056,803	-				+0.3
1,056,803	-				-0.0
1,056,803	-				-1.0
1,056,833	-		Rru_A0883	0.12	-0.1
1,056,833	-		Rru_A0883	0.12	+0.3
1,056,833	-		Rru_A0883	0.12	-0.0
1,056,947	-		Rru_A0883	0.34	-0.0
1,057,283	-				+1.0
1,057,910	-		Rru_A0884	0.65	-1.0
1,058,083	+		Rru_A0884	0.83	+1.1
1,058,143	+		Rru_A0884	0.89	+1.1
1,058,143	+		Rru_A0884	0.89	+0.6
1,058,143	+		Rru_A0884	0.89	+0.4
1,058,143	+		Rru_A0884	0.89	-0.0
1,058,144	-		Rru_A0884	0.89	+1.9
1,058,144	-		Rru_A0884	0.89	-0.0
1,058,144	-		Rru_A0884	0.89	-0.8
1,058,144	-		Rru_A0884	0.89	+1.6
1,058,144	-		Rru_A0884	0.89	-0.0
1,058,222	-				-0.0
1,058,311	+				-0.0
1,058,349	-				+0.8
1,058,349	-				+0.8
1,058,776	-		Rru_A0885	0.17	+0.5
1,058,776	-		Rru_A0885	0.17	+1.4
1,058,793	+		Rru_A0885	0.18	+1.5
1,058,793	+		Rru_A0885	0.18	-0.0
1,058,925	+		Rru_A0885	0.23	+0.9
1,058,925	+		Rru_A0885	0.23	-0.0
1,058,926	-		Rru_A0885	0.23	-0.0
1,058,928	-		Rru_A0885	0.24	+0.9
1,058,949	+		Rru_A0885	0.24	-1.0
1,058,983	-		Rru_A0885	0.26	-0.0
1,059,069	+		Rru_A0885	0.29	+0.9
1,059,070	-		Rru_A0885	0.29	-0.0
1,059,070	-		Rru_A0885	0.29	-0.0
1,059,117	+		Rru_A0885	0.31	+0.7
1,059,201	+		Rru_A0885	0.35	-1.0
1,059,201	+		Rru_A0885	0.35	+0.4
1,059,202	-		Rru_A0885	0.35	-0.0
1,059,202	-		Rru_A0885	0.35	+0.8