Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0033

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
31,539	+		Rru_B0031	0.70	+1.7
31,539	+		Rru_B0031	0.70	+0.2
31,539	+		Rru_B0031	0.70	+0.6
31,539	+		Rru_B0031	0.70	+0.2
31,540	-		Rru_B0031	0.70	+0.2
31,540	-		Rru_B0031	0.70	+1.3
31,540	-		Rru_B0031	0.70	-1.4
31,540	-		Rru_B0031	0.70	+0.2
31,548	+		Rru_B0031	0.71	-1.8
31,548	+		Rru_B0031	0.71	+0.2
31,548	+		Rru_B0031	0.71	+0.2
31,548	+		Rru_B0031	0.71	+1.5
31,548	+		Rru_B0031	0.71	+1.3
31,549	-		Rru_B0031	0.71	+1.0
31,549	-		Rru_B0031	0.71	+0.2
31,549	-		Rru_B0031	0.71	+0.2
31,549	-		Rru_B0031	0.71	+0.9
31,626	+		Rru_B0031	0.76	-0.1
31,626	+		Rru_B0031	0.76	+0.8
31,626	+		Rru_B0031	0.76	+1.7
31,626	+		Rru_B0031	0.76	+0.2
31,626	+		Rru_B0031	0.76	+0.6
31,626	+		Rru_B0031	0.76	+2.7
31,626	+		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	+1.1
31,627	-		Rru_B0031	0.76	+1.2
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	+1.2
31,627	-		Rru_B0031	0.76	+1.5
31,627	-		Rru_B0031	0.76	+1.3
31,627	-		Rru_B0031	0.76	+0.6
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	-0.8
31,627	-		Rru_B0031	0.76	+0.9
31,627	-		Rru_B0031	0.76	-0.8
31,627	-		Rru_B0031	0.76	+1.3
31,854	+				+1.2
31,938	+				+0.9
31,939	-				+1.2
31,951	+				+2.2
31,951	+				+0.2
31,951	+				+0.9
31,951	+				+0.3
31,951	+				+0.9
31,952	-				-0.3
31,952	-				+1.0
31,952	-				+0.6
31,953	+				+0.2
31,954	-				+0.2
31,971	+				+2.4
31,971	+				+0.2
31,971	+				+0.7
31,971	+				+2.8
31,971	+				+3.7
31,971	+				+1.0
31,971	+				+0.5
31,972	-				+0.2
31,972	-				+0.2
31,972	-				+0.9
31,972	-				+0.5
31,972	-				+1.3
31,972	-				+0.2
32,013	+				+0.7
32,013	+				+0.2
32,014	-				+0.2
32,029	+				+1.5
32,030	-				+2.6
32,030	-				+0.9
32,058	+				+1.4
32,059	-				+0.9
32,059	-				+0.8
32,128	+		Rru_B0032	0.17	-0.8
32,129	-		Rru_B0032	0.17	+0.2
32,129	-		Rru_B0032	0.17	+0.2
32,180	+		Rru_B0032	0.34	+1.7
32,180	+		Rru_B0032	0.34	+0.8
32,180	+		Rru_B0032	0.34	+0.2
32,180	+		Rru_B0032	0.34	+0.2
32,180	+		Rru_B0032	0.34	+1.2
32,181	-		Rru_B0032	0.35	+0.6
32,181	-		Rru_B0032	0.35	+0.7
32,181	-		Rru_B0032	0.35	+1.0
32,181	-		Rru_B0032	0.35	+0.2
32,239	+		Rru_B0032	0.54	+0.2
32,239	+		Rru_B0032	0.54	+0.2
32,240	-		Rru_B0032	0.54	+0.5
32,381	+				-1.4
32,381	+				+0.2
32,381	+				-0.8
32,381	+				+1.3
32,381	+				+0.2
32,382	-				+0.2
32,417	+				+0.3
32,418	-				+0.2
32,492	+				+1.3
32,502	-				+0.2
32,711	-		Rru_B0033	0.32	+0.7
32,711	-		Rru_B0033	0.32	+1.1
32,764	+		Rru_B0033	0.40	+1.2
32,819	+		Rru_B0033	0.48	+0.2
32,819	+		Rru_B0033	0.48	+0.2
32,820	-		Rru_B0033	0.48	+0.2
32,820	-		Rru_B0033	0.48	+0.7
32,828	+		Rru_B0033	0.49	+0.2
32,828	+		Rru_B0033	0.49	+0.2
32,828	+		Rru_B0033	0.49	+0.5
32,829	-		Rru_B0033	0.49	+1.2
32,830	+		Rru_B0033	0.49	+0.2
32,831	-		Rru_B0033	0.49	+0.6
32,831	-		Rru_B0033	0.49	+0.2
32,831	-		Rru_B0033	0.49	+0.8
32,831	-		Rru_B0033	0.49	+0.2
32,831	-		Rru_B0033	0.49	+0.2
32,851	+		Rru_B0033	0.52	+0.9
32,851	+		Rru_B0033	0.52	+3.2
32,851	+		Rru_B0033	0.52	+1.5
32,852	-		Rru_B0033	0.52	+1.0
32,852	-		Rru_B0033	0.52	+1.6
32,867	+		Rru_B0033	0.55	+0.9
32,867	+		Rru_B0033	0.55	+0.2
32,868	-		Rru_B0033	0.55	+0.2
32,868	-		Rru_B0033	0.55	+0.9
32,869	+		Rru_B0033	0.55	+0.2
32,869	+		Rru_B0033	0.55	+1.5
32,869	+		Rru_B0033	0.55	+1.2
32,869	+		Rru_B0033	0.55	+1.0
32,869	+		Rru_B0033	0.55	-0.4
32,870	-		Rru_B0033	0.55	+0.2
32,870	-		Rru_B0033	0.55	+0.2
32,870	-		Rru_B0033	0.55	-0.6
32,870	-		Rru_B0033	0.55	+1.0
32,881	+		Rru_B0033	0.56	+0.2
32,881	+		Rru_B0033	0.56	+0.5
32,881	+		Rru_B0033	0.56	+2.4
32,881	+		Rru_B0033	0.56	+1.0
32,881	+		Rru_B0033	0.56	-0.8
32,881	+		Rru_B0033	0.56	+0.4
32,882	-		Rru_B0033	0.57	+0.2
32,929	+		Rru_B0033	0.63	+0.2
32,929	+		Rru_B0033	0.63	-0.8
32,929	+		Rru_B0033	0.63	+1.3
32,930	-		Rru_B0033	0.63	+0.4
32,930	-		Rru_B0033	0.63	-0.3
32,930	-		Rru_B0033	0.63	-0.4
32,930	-		Rru_B0033	0.63	+0.2
32,930	-		Rru_B0033	0.63	+1.3
33,028	+		Rru_B0033	0.77	+1.1
33,029	-		Rru_B0033	0.77	-0.4
33,029	-		Rru_B0033	0.77	-0.8
33,029	-		Rru_B0033	0.77	-0.0
33,029	-		Rru_B0033	0.77	+1.2
33,029	-		Rru_B0033	0.77	+0.2
33,201	-				+1.5
33,247	+				+0.2
33,248	-				+0.2
33,271	+				+1.2
33,273	+				+0.2
33,275	+				+0.2
33,275	+				+0.1
33,275	+				+0.2
33,276	-				+2.4
33,276	-				+1.0
33,276	-				+0.2
33,278	+				-0.8
33,285	+				+1.1
33,286	-				+0.2
33,287	+				+1.2
33,288	-				+1.6
33,568	-				+0.2
33,672	+		Rru_B0035	0.36	+0.2
33,672	+		Rru_B0035	0.36	+0.4
33,672	+		Rru_B0035	0.36	+1.5
33,672	+		Rru_B0035	0.36	+0.2
33,673	-		Rru_B0035	0.37	-1.4
33,673	-		Rru_B0035	0.37	+0.2
33,674	+		Rru_B0035	0.37	-0.8
33,674	+		Rru_B0035	0.37	+1.0
33,674	+		Rru_B0035	0.37	+1.5
33,674	+		Rru_B0035	0.37	+2.2
33,674	+		Rru_B0035	0.37	+1.3
33,674	+		Rru_B0035	0.37	+0.2
33,675	-		Rru_B0035	0.37	+0.7
33,675	-		Rru_B0035	0.37	+1.2
33,675	-		Rru_B0035	0.37	+1.4
33,675	-		Rru_B0035	0.37	+0.2
33,675	-		Rru_B0035	0.37	+0.2
33,675	-		Rru_B0035	0.37	+0.2
33,675	-		Rru_B0035	0.37	+0.2
33,675	-		Rru_B0035	0.37	+0.2
33,675	-		Rru_B0035	0.37	-0.2
33,675	-		Rru_B0035	0.37	+1.7
33,675	-		Rru_B0035	0.37	-0.8
33,708	+		Rru_B0035	0.46	+2.6
33,708	+		Rru_B0035	0.46	+0.2
33,708	+		Rru_B0035	0.46	+0.5
33,709	-		Rru_B0035	0.46	+1.4
33,709	-		Rru_B0035	0.46	-0.1
33,709	-		Rru_B0035	0.46	+0.2
33,709	-		Rru_B0035	0.46	+0.2
33,714	+		Rru_B0035	0.47	+1.5
33,714	+		Rru_B0035	0.47	+2.1
33,714	+		Rru_B0035	0.47	+0.2
33,715	-		Rru_B0035	0.48	+0.2
33,715	-		Rru_B0035	0.48	-0.6
33,715	-		Rru_B0035	0.48	+0.2
33,715	-		Rru_B0035	0.48	+0.2
33,863	+		Rru_B0035	0.86	+1.4
33,863	+		Rru_B0035	0.86	+0.2
33,863	+		Rru_B0035	0.86	+1.0
33,863	+		Rru_B0035	0.86	+0.2
33,863	+		Rru_B0035	0.86	+0.2
33,864	-		Rru_B0035	0.86	+0.2
33,864	-		Rru_B0035	0.86	-0.1
33,864	-		Rru_B0035	0.86	+0.2
33,928	+				+0.2
33,928	+				-0.8
33,928	+				+0.4
33,929	-				+1.7
33,929	-				+0.9
33,930	+				+1.6
33,930	+				+1.2
33,930	+				+0.2
33,931	-				+1.1
33,931	-				+1.7
33,931	-				+0.2
34,001	+				+0.9
34,001	+				+1.6
34,001	+				+2.1
34,001	+				+0.2
34,001	+				+2.2
34,002	-				+1.0
34,002	-				+1.3
34,002	-				-0.8
34,002	-				+2.0
34,002	-				+1.9
34,002	-				+0.8
34,092	+		Rru_B0036	0.13	+0.7
34,092	+		Rru_B0036	0.13	+0.2
34,092	+		Rru_B0036	0.13	+1.0
34,093	-		Rru_B0036	0.13	+0.2
34,121	+		Rru_B0036	0.15	-1.4
34,121	+		Rru_B0036	0.15	+1.0
34,121	+		Rru_B0036	0.15	+0.2