Experiment: L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2945 and Ga0059261_2946 overlap by 4 nucleotides Ga0059261_2946 and Ga0059261_2947 are separated by 114 nucleotides
Ga0059261_2945: Ga0059261_2945 - Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation), at 3,056,322 to 3,057,728
_2945
Ga0059261_2946: Ga0059261_2946 - Transcriptional regulator, at 3,057,725 to 3,058,630
_2946
Ga0059261_2947: Ga0059261_2947 - Glycine/D-amino acid oxidases (deaminating), at 3,058,745 to 3,059,884
_2947
Position (kb)
3057
3058
3059 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3056.805 kb on + strand, within Ga0059261_2945 at 3056.806 kb on - strand, within Ga0059261_2945 at 3056.806 kb on - strand, within Ga0059261_2945 at 3056.887 kb on - strand, within Ga0059261_2945 at 3057.084 kb on + strand, within Ga0059261_2945 at 3057.090 kb on + strand, within Ga0059261_2945 at 3057.091 kb on - strand, within Ga0059261_2945 at 3057.168 kb on + strand, within Ga0059261_2945 at 3057.168 kb on + strand, within Ga0059261_2945 at 3057.168 kb on + strand, within Ga0059261_2945 at 3057.168 kb on + strand, within Ga0059261_2945 at 3057.169 kb on - strand, within Ga0059261_2945 at 3057.169 kb on - strand at 3057.179 kb on + strand, within Ga0059261_2945 at 3057.179 kb on + strand, within Ga0059261_2945 at 3057.180 kb on - strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.267 kb on + strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.268 kb on - strand, within Ga0059261_2945 at 3057.269 kb on + strand, within Ga0059261_2945 at 3057.269 kb on + strand, within Ga0059261_2945 at 3057.270 kb on - strand, within Ga0059261_2945 at 3057.270 kb on - strand, within Ga0059261_2945 at 3057.270 kb on - strand, within Ga0059261_2945 at 3057.270 kb on - strand, within Ga0059261_2945 at 3057.309 kb on + strand, within Ga0059261_2945 at 3057.309 kb on + strand, within Ga0059261_2945 at 3057.309 kb on + strand, within Ga0059261_2945 at 3057.310 kb on - strand, within Ga0059261_2945 at 3057.310 kb on - strand, within Ga0059261_2945 at 3057.310 kb on - strand, within Ga0059261_2945 at 3057.310 kb on - strand, within Ga0059261_2945 at 3057.310 kb on - strand, within Ga0059261_2945 at 3057.310 kb on - strand, within Ga0059261_2945 at 3057.330 kb on + strand, within Ga0059261_2945 at 3057.331 kb on - strand, within Ga0059261_2945 at 3057.331 kb on - strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.390 kb on + strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.391 kb on - strand, within Ga0059261_2945 at 3057.480 kb on + strand, within Ga0059261_2945 at 3057.480 kb on + strand, within Ga0059261_2945 at 3057.481 kb on - strand, within Ga0059261_2945 at 3057.499 kb on + strand, within Ga0059261_2945 at 3057.507 kb on + strand, within Ga0059261_2945 at 3057.507 kb on + strand, within Ga0059261_2945 at 3057.508 kb on - strand, within Ga0059261_2945 at 3057.540 kb on + strand, within Ga0059261_2945 at 3057.541 kb on - strand, within Ga0059261_2945 at 3057.638 kb on + strand at 3057.638 kb on + strand at 3057.638 kb on + strand at 3057.638 kb on + strand at 3057.639 kb on - strand at 3057.639 kb on - strand at 3057.639 kb on - strand at 3057.726 kb on + strand at 3057.819 kb on + strand, within Ga0059261_2946 at 3057.819 kb on + strand, within Ga0059261_2946 at 3057.819 kb on + strand, within Ga0059261_2946 at 3057.819 kb on + strand at 3057.820 kb on - strand, within Ga0059261_2946 at 3057.820 kb on - strand, within Ga0059261_2946 at 3057.820 kb on - strand, within Ga0059261_2946 at 3057.858 kb on + strand, within Ga0059261_2946 at 3057.858 kb on + strand at 3057.858 kb on + strand, within Ga0059261_2946 at 3057.858 kb on + strand, within Ga0059261_2946 at 3057.859 kb on - strand, within Ga0059261_2946 at 3057.859 kb on - strand, within Ga0059261_2946 at 3057.865 kb on - strand, within Ga0059261_2946 at 3057.929 kb on + strand, within Ga0059261_2946 at 3057.929 kb on + strand, within Ga0059261_2946 at 3057.930 kb on - strand, within Ga0059261_2946 at 3058.047 kb on + strand, within Ga0059261_2946 at 3058.047 kb on + strand, within Ga0059261_2946 at 3058.047 kb on + strand at 3058.047 kb on + strand, within Ga0059261_2946 at 3058.047 kb on + strand, within Ga0059261_2946 at 3058.047 kb on + strand, within Ga0059261_2946 at 3058.048 kb on - strand at 3058.048 kb on - strand, within Ga0059261_2946 at 3058.048 kb on - strand, within Ga0059261_2946 at 3058.048 kb on - strand, within Ga0059261_2946 at 3058.048 kb on - strand, within Ga0059261_2946 at 3058.048 kb on - strand at 3058.286 kb on - strand, within Ga0059261_2946 at 3058.286 kb on - strand, within Ga0059261_2946 at 3058.333 kb on + strand, within Ga0059261_2946 at 3058.333 kb on + strand, within Ga0059261_2946 at 3058.333 kb on + strand, within Ga0059261_2946 at 3058.334 kb on - strand, within Ga0059261_2946 at 3058.334 kb on - strand, within Ga0059261_2946 at 3058.334 kb on - strand, within Ga0059261_2946 at 3058.334 kb on - strand, within Ga0059261_2946 at 3058.334 kb on - strand, within Ga0059261_2946 at 3058.689 kb on + strand at 3058.689 kb on + strand at 3058.689 kb on + strand at 3058.689 kb on + strand at 3058.689 kb on + strand at 3058.689 kb on + strand at 3058.689 kb on + strand at 3058.690 kb on - strand at 3058.703 kb on + strand at 3058.794 kb on + strand at 3058.862 kb on + strand, within Ga0059261_2947 at 3058.879 kb on + strand, within Ga0059261_2947 at 3058.880 kb on - strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.892 kb on + strand, within Ga0059261_2947 at 3058.893 kb on - strand, within Ga0059261_2947 at 3058.893 kb on - strand, within Ga0059261_2947 at 3058.893 kb on - strand, within Ga0059261_2947 at 3058.893 kb on - strand, within Ga0059261_2947 at 3058.893 kb on - strand, within Ga0059261_2947 at 3058.973 kb on + strand, within Ga0059261_2947 at 3058.974 kb on - strand, within Ga0059261_2947 at 3059.321 kb on + strand, within Ga0059261_2947 at 3059.321 kb on + strand, within Ga0059261_2947 at 3059.322 kb on - strand, within Ga0059261_2947 at 3059.322 kb on - strand, within Ga0059261_2947 at 3059.322 kb on - strand, within Ga0059261_2947 at 3059.322 kb on - strand, within Ga0059261_2947 at 3059.322 kb on - strand, within Ga0059261_2947 at 3059.322 kb on - strand, within Ga0059261_2947 at 3059.501 kb on + strand, within Ga0059261_2947 at 3059.501 kb on + strand, within Ga0059261_2947 at 3059.501 kb on + strand, within Ga0059261_2947 at 3059.501 kb on + strand, within Ga0059261_2947 at 3059.501 kb on + strand, within Ga0059261_2947 at 3059.501 kb on + strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.502 kb on - strand, within Ga0059261_2947 at 3059.585 kb on + strand, within Ga0059261_2947 at 3059.585 kb on + strand, within Ga0059261_2947 at 3059.585 kb on + strand, within Ga0059261_2947 at 3059.586 kb on - strand, within Ga0059261_2947 at 3059.586 kb on - strand, within Ga0059261_2947 at 3059.586 kb on - strand, within Ga0059261_2947 at 3059.586 kb on - strand, within Ga0059261_2947 at 3059.626 kb on + strand, within Ga0059261_2947 at 3059.626 kb on + strand, within Ga0059261_2947 at 3059.626 kb on + strand, within Ga0059261_2947 at 3059.626 kb on + strand, within Ga0059261_2947 at 3059.626 kb on + strand, within Ga0059261_2947 at 3059.627 kb on - strand, within Ga0059261_2947 at 3059.627 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins remove 3,056,805 + Ga0059261_2945 0.34 -0.9 3,056,806 - Ga0059261_2945 0.34 -0.5 3,056,806 - Ga0059261_2945 0.34 -0.1 3,056,887 - Ga0059261_2945 0.40 +0.4 3,057,084 + Ga0059261_2945 0.54 -0.1 3,057,090 + Ga0059261_2945 0.55 -0.5 3,057,091 - Ga0059261_2945 0.55 +0.2 3,057,168 + Ga0059261_2945 0.60 -0.5 3,057,168 + Ga0059261_2945 0.60 -0.3 3,057,168 + Ga0059261_2945 0.60 +0.3 3,057,168 + Ga0059261_2945 0.60 -1.3 3,057,169 - Ga0059261_2945 0.60 -0.3 3,057,169 - +1.4 3,057,179 + Ga0059261_2945 0.61 +0.3 3,057,179 + Ga0059261_2945 0.61 +0.1 3,057,180 - Ga0059261_2945 0.61 -0.1 3,057,267 + Ga0059261_2945 0.67 -0.4 3,057,267 + -1.2 3,057,267 + Ga0059261_2945 0.67 +0.1 3,057,267 + Ga0059261_2945 0.67 +0.3 3,057,267 + Ga0059261_2945 0.67 -1.1 3,057,267 + Ga0059261_2945 0.67 +0.4 3,057,267 + Ga0059261_2945 0.67 +0.4 3,057,267 + Ga0059261_2945 0.67 -0.2 3,057,267 + Ga0059261_2945 0.67 -0.0 3,057,267 + Ga0059261_2945 0.67 -0.7 3,057,268 - Ga0059261_2945 0.67 +0.9 3,057,268 - Ga0059261_2945 0.67 +0.2 3,057,268 - Ga0059261_2945 0.67 +0.1 3,057,268 - Ga0059261_2945 0.67 +0.7 3,057,268 - Ga0059261_2945 0.67 +0.3 3,057,268 - Ga0059261_2945 0.67 +0.7 3,057,268 - Ga0059261_2945 0.67 +0.4 3,057,268 - Ga0059261_2945 0.67 +0.1 3,057,268 - Ga0059261_2945 0.67 -0.2 3,057,268 - Ga0059261_2945 0.67 +0.4 3,057,268 - Ga0059261_2945 0.67 -0.5 3,057,268 - Ga0059261_2945 0.67 +0.1 3,057,269 + Ga0059261_2945 0.67 +0.2 3,057,269 + Ga0059261_2945 0.67 +0.7 3,057,270 - Ga0059261_2945 0.67 -0.0 3,057,270 - Ga0059261_2945 0.67 +0.5 3,057,270 - Ga0059261_2945 0.67 +0.3 3,057,270 - Ga0059261_2945 0.67 +0.0 3,057,309 + Ga0059261_2945 0.70 +0.8 3,057,309 + Ga0059261_2945 0.70 +0.0 3,057,309 + Ga0059261_2945 0.70 -0.4 3,057,310 - Ga0059261_2945 0.70 +0.7 3,057,310 - Ga0059261_2945 0.70 -0.0 3,057,310 - Ga0059261_2945 0.70 +0.2 3,057,310 - Ga0059261_2945 0.70 +0.4 3,057,310 - Ga0059261_2945 0.70 +0.1 3,057,310 - Ga0059261_2945 0.70 +0.3 3,057,330 + Ga0059261_2945 0.72 +0.1 3,057,331 - Ga0059261_2945 0.72 +0.0 3,057,331 - Ga0059261_2945 0.72 -0.5 3,057,390 + Ga0059261_2945 0.76 +0.1 3,057,390 + Ga0059261_2945 0.76 +0.1 3,057,390 + Ga0059261_2945 0.76 -0.6 3,057,390 + Ga0059261_2945 0.76 -0.1 3,057,390 + Ga0059261_2945 0.76 +0.3 3,057,390 + Ga0059261_2945 0.76 +0.2 3,057,390 + Ga0059261_2945 0.76 -0.9 3,057,390 + Ga0059261_2945 0.76 -0.2 3,057,391 - Ga0059261_2945 0.76 -0.1 3,057,391 - Ga0059261_2945 0.76 +0.5 3,057,391 - Ga0059261_2945 0.76 +0.2 3,057,391 - Ga0059261_2945 0.76 -0.2 3,057,391 - Ga0059261_2945 0.76 +1.5 3,057,391 - Ga0059261_2945 0.76 -0.1 3,057,391 - Ga0059261_2945 0.76 +0.2 3,057,391 - Ga0059261_2945 0.76 +0.4 3,057,391 - Ga0059261_2945 0.76 -0.1 3,057,391 - Ga0059261_2945 0.76 +0.7 3,057,391 - Ga0059261_2945 0.76 -0.3 3,057,480 + Ga0059261_2945 0.82 -0.4 3,057,480 + Ga0059261_2945 0.82 +0.1 3,057,481 - Ga0059261_2945 0.82 -4.7 3,057,499 + Ga0059261_2945 0.84 +0.2 3,057,507 + Ga0059261_2945 0.84 -0.3 3,057,507 + Ga0059261_2945 0.84 -0.2 3,057,508 - Ga0059261_2945 0.84 -0.9 3,057,540 + Ga0059261_2945 0.87 -0.4 3,057,541 - Ga0059261_2945 0.87 -1.3 3,057,638 + +0.2 3,057,638 + +0.0 3,057,638 + +0.2 3,057,638 + +0.8 3,057,639 - -0.1 3,057,639 - -0.5 3,057,639 - +0.2 3,057,726 + +1.1 3,057,819 + Ga0059261_2946 0.10 -0.0 3,057,819 + Ga0059261_2946 0.10 -0.4 3,057,819 + Ga0059261_2946 0.10 -0.1 3,057,819 + +0.4 3,057,820 - Ga0059261_2946 0.10 +0.4 3,057,820 - Ga0059261_2946 0.10 -0.3 3,057,820 - Ga0059261_2946 0.10 +0.2 3,057,858 + Ga0059261_2946 0.15 +0.2 3,057,858 + -2.1 3,057,858 + Ga0059261_2946 0.15 -0.4 3,057,858 + Ga0059261_2946 0.15 +0.1 3,057,859 - Ga0059261_2946 0.15 -0.3 3,057,859 - Ga0059261_2946 0.15 -0.8 3,057,865 - Ga0059261_2946 0.15 +0.1 3,057,929 + Ga0059261_2946 0.23 -0.3 3,057,929 + Ga0059261_2946 0.23 -0.0 3,057,930 - Ga0059261_2946 0.23 +0.0 3,058,047 + Ga0059261_2946 0.36 -0.7 3,058,047 + Ga0059261_2946 0.36 -0.4 3,058,047 + +1.1 3,058,047 + Ga0059261_2946 0.36 +0.2 3,058,047 + Ga0059261_2946 0.36 -0.1 3,058,047 + Ga0059261_2946 0.36 -1.0 3,058,048 - +0.8 3,058,048 - Ga0059261_2946 0.36 -0.3 3,058,048 - Ga0059261_2946 0.36 -0.3 3,058,048 - Ga0059261_2946 0.36 -0.6 3,058,048 - Ga0059261_2946 0.36 -0.1 3,058,048 - +0.9 3,058,286 - Ga0059261_2946 0.62 -0.1 3,058,286 - Ga0059261_2946 0.62 +1.2 3,058,333 + Ga0059261_2946 0.67 +0.1 3,058,333 + Ga0059261_2946 0.67 -0.4 3,058,333 + Ga0059261_2946 0.67 -0.5 3,058,334 - Ga0059261_2946 0.67 -1.1 3,058,334 - Ga0059261_2946 0.67 +0.7 3,058,334 - Ga0059261_2946 0.67 -0.0 3,058,334 - Ga0059261_2946 0.67 +0.1 3,058,334 - Ga0059261_2946 0.67 -1.0 3,058,689 + -0.9 3,058,689 + -0.0 3,058,689 + -0.4 3,058,689 + +1.3 3,058,689 + -0.2 3,058,689 + +0.1 3,058,689 + -0.0 3,058,690 - -2.7 3,058,703 + -0.0 3,058,794 + -0.0 3,058,862 + Ga0059261_2947 0.10 -0.3 3,058,879 + Ga0059261_2947 0.12 +0.0 3,058,880 - Ga0059261_2947 0.12 -0.1 3,058,892 + Ga0059261_2947 0.13 -0.3 3,058,892 + Ga0059261_2947 0.13 -0.2 3,058,892 + Ga0059261_2947 0.13 -0.1 3,058,892 + Ga0059261_2947 0.13 -0.5 3,058,892 + Ga0059261_2947 0.13 +0.7 3,058,892 + Ga0059261_2947 0.13 -0.5 3,058,892 + Ga0059261_2947 0.13 +0.2 3,058,893 - Ga0059261_2947 0.13 -0.1 3,058,893 - Ga0059261_2947 0.13 +0.1 3,058,893 - Ga0059261_2947 0.13 -1.0 3,058,893 - Ga0059261_2947 0.13 +0.2 3,058,893 - Ga0059261_2947 0.13 +0.1 3,058,973 + Ga0059261_2947 0.20 +0.6 3,058,974 - Ga0059261_2947 0.20 -0.4 3,059,321 + Ga0059261_2947 0.51 +0.8 3,059,321 + Ga0059261_2947 0.51 +0.3 3,059,322 - Ga0059261_2947 0.51 +0.2 3,059,322 - Ga0059261_2947 0.51 +1.6 3,059,322 - Ga0059261_2947 0.51 +0.1 3,059,322 - Ga0059261_2947 0.51 -0.1 3,059,322 - Ga0059261_2947 0.51 +0.5 3,059,322 - Ga0059261_2947 0.51 -0.2 3,059,501 + Ga0059261_2947 0.66 -0.4 3,059,501 + Ga0059261_2947 0.66 -1.0 3,059,501 + Ga0059261_2947 0.66 -0.2 3,059,501 + Ga0059261_2947 0.66 +0.5 3,059,501 + Ga0059261_2947 0.66 -0.4 3,059,501 + Ga0059261_2947 0.66 -0.4 3,059,502 - Ga0059261_2947 0.66 -1.1 3,059,502 - Ga0059261_2947 0.66 +0.8 3,059,502 - Ga0059261_2947 0.66 -1.2 3,059,502 - Ga0059261_2947 0.66 +0.3 3,059,502 - Ga0059261_2947 0.66 +0.5 3,059,502 - Ga0059261_2947 0.66 -0.2 3,059,502 - Ga0059261_2947 0.66 -0.2 3,059,585 + Ga0059261_2947 0.74 -0.4 3,059,585 + Ga0059261_2947 0.74 +1.0 3,059,585 + Ga0059261_2947 0.74 +0.5 3,059,586 - Ga0059261_2947 0.74 -0.4 3,059,586 - Ga0059261_2947 0.74 +0.3 3,059,586 - Ga0059261_2947 0.74 -2.4 3,059,586 - Ga0059261_2947 0.74 -0.6 3,059,626 + Ga0059261_2947 0.77 -0.3 3,059,626 + Ga0059261_2947 0.77 -0.1 3,059,626 + Ga0059261_2947 0.77 +0.4 3,059,626 + Ga0059261_2947 0.77 -0.0 3,059,626 + Ga0059261_2947 0.77 +0.2 3,059,627 - Ga0059261_2947 0.77 -0.1 3,059,627 - +0.9
Or see this region's nucleotide sequence