Experiment: L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2071 and Ga0059261_2072 overlap by 4 nucleotides Ga0059261_2072 and Ga0059261_2073 are separated by 5 nucleotides Ga0059261_2073 and Ga0059261_2074 overlap by 4 nucleotides
Ga0059261_2070: Ga0059261_2070 - Flagellar assembly protein FliH, at 2,169,915 to 2,170,634
_2070
Ga0059261_2071: Ga0059261_2071 - flagellar motor switch protein FliG, at 2,170,627 to 2,171,637
_2071
Ga0059261_2072: Ga0059261_2072 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 2,171,634 to 2,173,301
_2072
Ga0059261_2073: Ga0059261_2073 - flagellar hook-basal body complex protein FliE, at 2,173,307 to 2,173,678
_2073
Ga0059261_2074: Ga0059261_2074 - Sigma-54 interaction domain/Bacterial regulatory protein, Fis family, at 2,173,675 to 2,174,922
_2074
Position (kb)
2171
2172
2173
2174 Strain fitness (log2 ratio)
-1
0
1
2 at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.634 kb on + strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.635 kb on - strand at 2170.890 kb on + strand, within Ga0059261_2071 at 2170.890 kb on + strand, within Ga0059261_2071 at 2170.890 kb on + strand, within Ga0059261_2071 at 2170.890 kb on + strand, within Ga0059261_2071 at 2170.954 kb on + strand, within Ga0059261_2071 at 2170.954 kb on + strand, within Ga0059261_2071 at 2170.954 kb on + strand, within Ga0059261_2071 at 2170.954 kb on + strand, within Ga0059261_2071 at 2170.954 kb on + strand, within Ga0059261_2071 at 2170.954 kb on + strand, within Ga0059261_2071 at 2170.955 kb on - strand, within Ga0059261_2071 at 2171.951 kb on - strand, within Ga0059261_2072 at 2172.012 kb on + strand, within Ga0059261_2072 at 2172.012 kb on + strand, within Ga0059261_2072 at 2172.013 kb on - strand, within Ga0059261_2072 at 2172.013 kb on - strand, within Ga0059261_2072 at 2172.013 kb on - strand, within Ga0059261_2072 at 2172.190 kb on + strand, within Ga0059261_2072 at 2172.190 kb on + strand, within Ga0059261_2072 at 2172.191 kb on - strand, within Ga0059261_2072 at 2172.191 kb on - strand, within Ga0059261_2072 at 2172.191 kb on - strand, within Ga0059261_2072 at 2172.191 kb on - strand, within Ga0059261_2072 at 2172.191 kb on - strand at 2172.335 kb on + strand, within Ga0059261_2072 at 2172.335 kb on + strand at 2172.336 kb on - strand, within Ga0059261_2072 at 2172.529 kb on + strand, within Ga0059261_2072 at 2172.529 kb on + strand, within Ga0059261_2072 at 2172.529 kb on + strand, within Ga0059261_2072 at 2172.529 kb on + strand, within Ga0059261_2072 at 2172.530 kb on - strand, within Ga0059261_2072 at 2172.530 kb on - strand, within Ga0059261_2072 at 2172.530 kb on - strand, within Ga0059261_2072 at 2172.923 kb on - strand, within Ga0059261_2072 at 2172.982 kb on + strand, within Ga0059261_2072 at 2172.982 kb on + strand, within Ga0059261_2072 at 2172.983 kb on - strand, within Ga0059261_2072 at 2172.983 kb on - strand, within Ga0059261_2072 at 2172.983 kb on - strand, within Ga0059261_2072 at 2173.070 kb on + strand, within Ga0059261_2072 at 2173.215 kb on + strand at 2173.215 kb on + strand at 2173.215 kb on + strand at 2173.215 kb on + strand at 2173.216 kb on - strand at 2173.216 kb on - strand at 2173.216 kb on - strand at 2173.216 kb on - strand at 2173.216 kb on - strand at 2173.301 kb on + strand at 2173.301 kb on + strand at 2173.301 kb on + strand at 2173.302 kb on - strand at 2173.302 kb on - strand at 2173.302 kb on - strand at 2173.335 kb on + strand at 2173.336 kb on - strand at 2173.444 kb on - strand, within Ga0059261_2073 at 2173.755 kb on + strand at 2173.756 kb on - strand at 2174.144 kb on + strand, within Ga0059261_2074 at 2174.144 kb on + strand, within Ga0059261_2074 at 2174.145 kb on - strand, within Ga0059261_2074 at 2174.147 kb on + strand, within Ga0059261_2074 at 2174.147 kb on + strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074 at 2174.148 kb on - strand, within Ga0059261_2074
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins remove 2,170,634 + +0.7 2,170,634 + -0.5 2,170,634 + +0.6 2,170,634 + -0.1 2,170,634 + +0.2 2,170,634 + -0.1 2,170,634 + +0.6 2,170,634 + -0.2 2,170,634 + +0.2 2,170,634 + -0.4 2,170,635 - -0.4 2,170,635 - +1.0 2,170,635 - +0.9 2,170,635 - +0.3 2,170,635 - -0.1 2,170,635 - +0.5 2,170,635 - -0.0 2,170,635 - -0.3 2,170,890 + Ga0059261_2071 0.26 +0.5 2,170,890 + Ga0059261_2071 0.26 -0.3 2,170,890 + Ga0059261_2071 0.26 +0.8 2,170,890 + Ga0059261_2071 0.26 +0.1 2,170,954 + Ga0059261_2071 0.32 +0.5 2,170,954 + Ga0059261_2071 0.32 +0.5 2,170,954 + Ga0059261_2071 0.32 +0.5 2,170,954 + Ga0059261_2071 0.32 +0.6 2,170,954 + Ga0059261_2071 0.32 +1.1 2,170,954 + Ga0059261_2071 0.32 +0.2 2,170,955 - Ga0059261_2071 0.32 +0.8 2,171,951 - Ga0059261_2072 0.19 +0.9 2,172,012 + Ga0059261_2072 0.23 +0.1 2,172,012 + Ga0059261_2072 0.23 +1.0 2,172,013 - Ga0059261_2072 0.23 +0.8 2,172,013 - Ga0059261_2072 0.23 -1.5 2,172,013 - Ga0059261_2072 0.23 +0.3 2,172,190 + Ga0059261_2072 0.33 +1.0 2,172,190 + Ga0059261_2072 0.33 +0.0 2,172,191 - Ga0059261_2072 0.33 -0.1 2,172,191 - Ga0059261_2072 0.33 +0.5 2,172,191 - Ga0059261_2072 0.33 +0.8 2,172,191 - Ga0059261_2072 0.33 -0.6 2,172,191 - +0.5 2,172,335 + Ga0059261_2072 0.42 +0.5 2,172,335 + +1.8 2,172,336 - Ga0059261_2072 0.42 +0.3 2,172,529 + Ga0059261_2072 0.54 +0.7 2,172,529 + Ga0059261_2072 0.54 -0.1 2,172,529 + Ga0059261_2072 0.54 +0.4 2,172,529 + Ga0059261_2072 0.54 +0.6 2,172,530 - Ga0059261_2072 0.54 +0.7 2,172,530 - Ga0059261_2072 0.54 -0.1 2,172,530 - Ga0059261_2072 0.54 -0.6 2,172,923 - Ga0059261_2072 0.77 +0.2 2,172,982 + Ga0059261_2072 0.81 +0.9 2,172,982 + Ga0059261_2072 0.81 +0.8 2,172,983 - Ga0059261_2072 0.81 +0.3 2,172,983 - Ga0059261_2072 0.81 +0.2 2,172,983 - Ga0059261_2072 0.81 +0.5 2,173,070 + Ga0059261_2072 0.86 +0.3 2,173,215 + +0.1 2,173,215 + +0.2 2,173,215 + -0.3 2,173,215 + +0.1 2,173,216 - +0.7 2,173,216 - +0.7 2,173,216 - +0.3 2,173,216 - +0.7 2,173,216 - +0.4 2,173,301 + +0.8 2,173,301 + +0.5 2,173,301 + +0.0 2,173,302 - +0.2 2,173,302 - +0.3 2,173,302 - +1.9 2,173,335 + +0.0 2,173,336 - +0.5 2,173,444 - Ga0059261_2073 0.37 +0.0 2,173,755 + -0.5 2,173,756 - +0.4 2,174,144 + Ga0059261_2074 0.38 -0.1 2,174,144 + Ga0059261_2074 0.38 +0.3 2,174,145 - Ga0059261_2074 0.38 +0.1 2,174,147 + Ga0059261_2074 0.38 -0.6 2,174,147 + Ga0059261_2074 0.38 +0.2 2,174,148 - Ga0059261_2074 0.38 +0.4 2,174,148 - Ga0059261_2074 0.38 +0.2 2,174,148 - Ga0059261_2074 0.38 +1.0 2,174,148 - Ga0059261_2074 0.38 +0.7 2,174,148 - Ga0059261_2074 0.38 +0.2 2,174,148 - Ga0059261_2074 0.38 +0.5 2,174,148 - Ga0059261_2074 0.38 +0.4 2,174,148 - Ga0059261_2074 0.38 +0.7 2,174,148 - Ga0059261_2074 0.38 +0.3
Or see this region's nucleotide sequence