Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26860

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26850 and BWI76_RS26855 are separated by 20 nucleotidesBWI76_RS26855 and BWI76_RS26860 overlap by 10 nucleotidesBWI76_RS26860 and BWI76_RS26865 are separated by 711 nucleotides BWI76_RS26850: BWI76_RS26850 - cellulose synthase catalytic subunit (UDP-forming), at 5,569,316 to 5,571,427 _RS26850 BWI76_RS26855: BWI76_RS26855 - cellulose synthase operon protein YhjQ, at 5,571,448 to 5,572,251 _RS26855 BWI76_RS26860: BWI76_RS26860 - hypothetical protein, at 5,572,242 to 5,572,799 _RS26860 BWI76_RS26865: BWI76_RS26865 - dipeptide ABC transporter ATP-binding protein, at 5,573,511 to 5,574,524 _RS26865 Position (kb) 5572 5573Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5571.304 kb on + strandat 5571.348 kb on - strandat 5571.371 kb on - strandat 5571.453 kb on + strandat 5571.453 kb on + strandat 5571.453 kb on + strandat 5571.461 kb on - strandat 5571.461 kb on - strandat 5571.461 kb on - strandat 5571.472 kb on + strandat 5571.480 kb on - strandat 5571.480 kb on - strandat 5571.480 kb on - strandat 5571.481 kb on - strandat 5571.583 kb on + strand, within BWI76_RS26855at 5571.601 kb on - strand, within BWI76_RS26855at 5571.625 kb on + strand, within BWI76_RS26855at 5571.703 kb on + strand, within BWI76_RS26855at 5571.732 kb on + strand, within BWI76_RS26855at 5571.744 kb on + strand, within BWI76_RS26855at 5571.868 kb on - strand, within BWI76_RS26855at 5571.952 kb on + strand, within BWI76_RS26855at 5572.052 kb on - strand, within BWI76_RS26855at 5572.179 kb on - strandat 5572.194 kb on + strandat 5572.204 kb on + strandat 5572.240 kb on + strandat 5572.308 kb on - strand, within BWI76_RS26860at 5572.337 kb on - strand, within BWI76_RS26860at 5572.349 kb on - strand, within BWI76_RS26860at 5572.398 kb on - strand, within BWI76_RS26860at 5572.485 kb on + strand, within BWI76_RS26860at 5572.524 kb on + strand, within BWI76_RS26860at 5572.554 kb on - strand, within BWI76_RS26860at 5572.558 kb on - strand, within BWI76_RS26860at 5572.558 kb on - strand, within BWI76_RS26860at 5572.561 kb on + strand, within BWI76_RS26860at 5572.576 kb on + strand, within BWI76_RS26860at 5572.608 kb on - strand, within BWI76_RS26860at 5572.608 kb on - strand, within BWI76_RS26860at 5572.611 kb on + strand, within BWI76_RS26860at 5572.619 kb on + strand, within BWI76_RS26860at 5572.621 kb on + strand, within BWI76_RS26860at 5572.621 kb on + strand, within BWI76_RS26860at 5572.621 kb on + strand, within BWI76_RS26860at 5572.621 kb on + strandat 5572.627 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.629 kb on - strand, within BWI76_RS26860at 5572.641 kb on - strand, within BWI76_RS26860at 5572.656 kb on + strand, within BWI76_RS26860at 5572.656 kb on + strandat 5572.664 kb on - strand, within BWI76_RS26860at 5572.669 kb on + strand, within BWI76_RS26860at 5572.677 kb on - strand, within BWI76_RS26860at 5572.685 kb on + strand, within BWI76_RS26860at 5572.693 kb on - strand, within BWI76_RS26860at 5572.693 kb on - strand, within BWI76_RS26860at 5572.693 kb on - strand, within BWI76_RS26860at 5572.698 kb on - strand, within BWI76_RS26860at 5572.718 kb on + strand, within BWI76_RS26860at 5572.718 kb on + strand, within BWI76_RS26860at 5572.723 kb on + strand, within BWI76_RS26860at 5572.723 kb on + strand, within BWI76_RS26860at 5572.723 kb on + strand, within BWI76_RS26860at 5572.723 kb on + strand, within BWI76_RS26860at 5572.723 kb on + strand, within BWI76_RS26860at 5572.723 kb on + strand, within BWI76_RS26860at 5572.724 kb on - strand, within BWI76_RS26860at 5572.726 kb on - strand, within BWI76_RS26860at 5572.731 kb on - strand, within BWI76_RS26860at 5572.731 kb on - strand, within BWI76_RS26860at 5572.731 kb on - strand, within BWI76_RS26860at 5572.739 kb on + strand, within BWI76_RS26860at 5572.739 kb on + strand, within BWI76_RS26860at 5572.774 kb on - strandat 5572.902 kb on + strandat 5572.902 kb on + strandat 5572.902 kb on + strandat 5572.911 kb on - strandat 5572.928 kb on + strandat 5572.934 kb on - strandat 5572.936 kb on - strandat 5572.956 kb on + strandat 5572.956 kb on + strandat 5572.964 kb on - strandat 5572.969 kb on - strandat 5572.987 kb on - strandat 5573.056 kb on - strandat 5573.059 kb on + strandat 5573.063 kb on + strandat 5573.071 kb on - strandat 5573.073 kb on + strandat 5573.082 kb on + strandat 5573.082 kb on + strandat 5573.118 kb on + strandat 5573.126 kb on - strandat 5573.135 kb on - strandat 5573.138 kb on + strandat 5573.145 kb on + strandat 5573.148 kb on - strandat 5573.153 kb on - strandat 5573.156 kb on - strandat 5573.279 kb on - strandat 5573.279 kb on - strandat 5573.283 kb on + strandat 5573.285 kb on + strandat 5573.290 kb on + strandat 5573.293 kb on - strandat 5573.293 kb on - strandat 5573.325 kb on - strandat 5573.375 kb on + strandat 5573.404 kb on + strandat 5573.405 kb on + strandat 5573.405 kb on + strandat 5573.405 kb on + strandat 5573.405 kb on + strandat 5573.412 kb on - strandat 5573.413 kb on - strandat 5573.413 kb on - strandat 5573.413 kb on - strandat 5573.415 kb on + strandat 5573.415 kb on + strandat 5573.418 kb on + strandat 5573.423 kb on - strandat 5573.423 kb on - strandat 5573.427 kb on + strandat 5573.436 kb on - strandat 5573.440 kb on - strandat 5573.454 kb on - strandat 5573.454 kb on - strandat 5573.481 kb on + strandat 5573.481 kb on + strandat 5573.481 kb on + strandat 5573.488 kb on + strandat 5573.489 kb on - strandat 5573.504 kb on + strandat 5573.504 kb on + strandat 5573.504 kb on + strandat 5573.512 kb on - strandat 5573.512 kb on - strandat 5573.512 kb on - strandat 5573.512 kb on - strandat 5573.514 kb on + strandat 5573.514 kb on + strandat 5573.514 kb on + strandat 5573.522 kb on - strandat 5573.522 kb on - strandat 5573.522 kb on - strandat 5573.575 kb on + strandat 5573.605 kb on - strandat 5573.611 kb on - strandat 5573.729 kb on + strand, within BWI76_RS26865at 5573.734 kb on + strand, within BWI76_RS26865at 5573.734 kb on + strand, within BWI76_RS26865at 5573.752 kb on - strand, within BWI76_RS26865at 5573.778 kb on + strand, within BWI76_RS26865

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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5,571,304 + +0.4
5,571,348 - -0.8
5,571,371 - +0.3
5,571,453 + +0.4
5,571,453 + +0.1
5,571,453 + +1.3
5,571,461 - -0.9
5,571,461 - +0.1
5,571,461 - +1.1
5,571,472 + +0.7
5,571,480 - +0.7
5,571,480 - +0.8
5,571,480 - -0.6
5,571,481 - -0.3
5,571,583 + BWI76_RS26855 0.17 -0.2
5,571,601 - BWI76_RS26855 0.19 -1.7
5,571,625 + BWI76_RS26855 0.22 +0.6
5,571,703 + BWI76_RS26855 0.32 -0.1
5,571,732 + BWI76_RS26855 0.35 -0.1
5,571,744 + BWI76_RS26855 0.37 +0.7
5,571,868 - BWI76_RS26855 0.52 +0.4
5,571,952 + BWI76_RS26855 0.63 +0.6
5,572,052 - BWI76_RS26855 0.75 +0.1
5,572,179 - +0.6
5,572,194 + +1.1
5,572,204 + +0.5
5,572,240 + +0.1
5,572,308 - BWI76_RS26860 0.12 +2.4
5,572,337 - BWI76_RS26860 0.17 +0.9
5,572,349 - BWI76_RS26860 0.19 -0.2
5,572,398 - BWI76_RS26860 0.28 +1.1
5,572,485 + BWI76_RS26860 0.44 +0.1
5,572,524 + BWI76_RS26860 0.51 -1.0
5,572,554 - BWI76_RS26860 0.56 -0.7
5,572,558 - BWI76_RS26860 0.57 +0.1
5,572,558 - BWI76_RS26860 0.57 +0.8
5,572,561 + BWI76_RS26860 0.57 +2.0
5,572,576 + BWI76_RS26860 0.60 -0.5
5,572,608 - BWI76_RS26860 0.66 +0.7
5,572,608 - BWI76_RS26860 0.66 +0.7
5,572,611 + BWI76_RS26860 0.66 +0.5
5,572,619 + BWI76_RS26860 0.68 +0.8
5,572,621 + BWI76_RS26860 0.68 +0.8
5,572,621 + BWI76_RS26860 0.68 +0.7
5,572,621 + BWI76_RS26860 0.68 +0.4
5,572,621 + -0.0
5,572,627 - BWI76_RS26860 0.69 +0.4
5,572,629 - BWI76_RS26860 0.69 +1.6
5,572,629 - BWI76_RS26860 0.69 +0.7
5,572,629 - BWI76_RS26860 0.69 +1.0
5,572,629 - BWI76_RS26860 0.69 +1.2
5,572,629 - BWI76_RS26860 0.69 +0.7
5,572,629 - BWI76_RS26860 0.69 +0.6
5,572,629 - BWI76_RS26860 0.69 -0.5
5,572,629 - BWI76_RS26860 0.69 +0.2
5,572,641 - BWI76_RS26860 0.72 +1.1
5,572,656 + BWI76_RS26860 0.74 +1.0
5,572,656 + +0.4
5,572,664 - BWI76_RS26860 0.76 +1.1
5,572,669 + BWI76_RS26860 0.77 +0.4
5,572,677 - BWI76_RS26860 0.78 +1.4
5,572,685 + BWI76_RS26860 0.79 +1.2
5,572,693 - BWI76_RS26860 0.81 +0.7
5,572,693 - BWI76_RS26860 0.81 +1.4
5,572,693 - BWI76_RS26860 0.81 +0.2
5,572,698 - BWI76_RS26860 0.82 +0.7
5,572,718 + BWI76_RS26860 0.85 +0.5
5,572,718 + BWI76_RS26860 0.85 +1.8
5,572,723 + BWI76_RS26860 0.86 -0.7
5,572,723 + BWI76_RS26860 0.86 -0.0
5,572,723 + BWI76_RS26860 0.86 -2.0
5,572,723 + BWI76_RS26860 0.86 +0.4
5,572,723 + BWI76_RS26860 0.86 +1.1
5,572,723 + BWI76_RS26860 0.86 +0.1
5,572,724 - BWI76_RS26860 0.86 +0.5
5,572,726 - BWI76_RS26860 0.87 +1.0
5,572,731 - BWI76_RS26860 0.88 -1.0
5,572,731 - BWI76_RS26860 0.88 +0.2
5,572,731 - BWI76_RS26860 0.88 +0.9
5,572,739 + BWI76_RS26860 0.89 +0.1
5,572,739 + BWI76_RS26860 0.89 -0.3
5,572,774 - +0.7
5,572,902 + +0.5
5,572,902 + +1.1
5,572,902 + +0.4
5,572,911 - -0.7
5,572,928 + -0.7
5,572,934 - -1.1
5,572,936 - -1.2
5,572,956 + -1.6
5,572,956 + +0.6
5,572,964 - -0.0
5,572,969 - -2.3
5,572,987 - +0.5
5,573,056 - -0.9
5,573,059 + -0.5
5,573,063 + -0.4
5,573,071 - -0.2
5,573,073 + -0.6
5,573,082 + +0.7
5,573,082 + +1.0
5,573,118 + +1.8
5,573,126 - -0.2
5,573,135 - +0.9
5,573,138 + -0.5
5,573,145 + +1.4
5,573,148 - -1.2
5,573,153 - -1.0
5,573,156 - -0.9
5,573,279 - -1.6
5,573,279 - +1.0
5,573,283 + +1.2
5,573,285 + -0.1
5,573,290 + +1.7
5,573,293 - +0.5
5,573,293 - +0.4
5,573,325 - +0.0
5,573,375 + -0.0
5,573,404 + -0.4
5,573,405 + +0.8
5,573,405 + +0.9
5,573,405 + +0.2
5,573,405 + -0.8
5,573,412 - -0.6
5,573,413 - +1.0
5,573,413 - +0.5
5,573,413 - +0.1
5,573,415 + +0.4
5,573,415 + -0.0
5,573,418 + +1.1
5,573,423 - +0.5
5,573,423 - -1.8
5,573,427 + +0.2
5,573,436 - +1.7
5,573,440 - +0.4
5,573,454 - +0.5
5,573,454 - -1.5
5,573,481 + -1.2
5,573,481 + +0.1
5,573,481 + +1.3
5,573,488 + +0.4
5,573,489 - +0.5
5,573,504 + +0.1
5,573,504 + -0.4
5,573,504 + +1.5
5,573,512 - +0.0
5,573,512 - -0.3
5,573,512 - -0.1
5,573,512 - -0.5
5,573,514 + +0.8
5,573,514 + +0.1
5,573,514 + -0.0
5,573,522 - -1.1
5,573,522 - -0.6
5,573,522 - +0.6
5,573,575 + -0.1
5,573,605 - +0.5
5,573,611 - +1.0
5,573,729 + BWI76_RS26865 0.21 +0.3
5,573,734 + BWI76_RS26865 0.22 -0.5
5,573,734 + BWI76_RS26865 0.22 +0.7
5,573,752 - BWI76_RS26865 0.24 -3.3
5,573,778 + BWI76_RS26865 0.26 +0.2

Or see this region's nucleotide sequence