Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26830 and BWI76_RS26835 are separated by 11 nucleotides BWI76_RS26835 and BWI76_RS26840 are separated by 2 nucleotides BWI76_RS26840 and BWI76_RS26845 overlap by 4 nucleotides
BWI76_RS26830: BWI76_RS26830 - endoglucanase, at 5,561,376 to 5,562,380
_RS26830
BWI76_RS26835: BWI76_RS26835 - hypothetical protein, at 5,562,392 to 5,562,865
_RS26835
BWI76_RS26840: BWI76_RS26840 - cellulose synthase, at 5,562,868 to 5,566,920
_RS26840
BWI76_RS26845: BWI76_RS26845 - cellulose synthase regulator BcsB, at 5,566,917 to 5,569,319
_RS26845
Position (kb)
5562
5563
5564
5565
5566
5567 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5561.868 kb on - strand, within BWI76_RS26830 at 5561.876 kb on - strand, within BWI76_RS26830 at 5562.152 kb on + strand, within BWI76_RS26830 at 5562.160 kb on - strand, within BWI76_RS26830 at 5562.324 kb on - strand at 5562.454 kb on - strand, within BWI76_RS26835 at 5562.471 kb on + strand, within BWI76_RS26835 at 5562.478 kb on - strand, within BWI76_RS26835 at 5562.484 kb on - strand, within BWI76_RS26835 at 5562.523 kb on + strand, within BWI76_RS26835 at 5562.604 kb on + strand, within BWI76_RS26835 at 5562.612 kb on - strand, within BWI76_RS26835 at 5562.612 kb on - strand, within BWI76_RS26835 at 5562.622 kb on - strand, within BWI76_RS26835 at 5562.657 kb on + strand, within BWI76_RS26835 at 5562.665 kb on - strand, within BWI76_RS26835 at 5562.969 kb on - strand at 5562.975 kb on - strand at 5563.055 kb on + strand at 5563.057 kb on + strand at 5563.119 kb on + strand at 5563.123 kb on - strand at 5563.142 kb on - strand at 5563.219 kb on + strand at 5563.355 kb on - strand, within BWI76_RS26840 at 5563.497 kb on - strand, within BWI76_RS26840 at 5563.520 kb on + strand, within BWI76_RS26840 at 5563.520 kb on + strand, within BWI76_RS26840 at 5563.528 kb on - strand at 5563.788 kb on + strand, within BWI76_RS26840 at 5563.870 kb on + strand, within BWI76_RS26840 at 5563.934 kb on - strand, within BWI76_RS26840 at 5563.975 kb on - strand, within BWI76_RS26840 at 5564.113 kb on + strand, within BWI76_RS26840 at 5564.231 kb on + strand, within BWI76_RS26840 at 5564.239 kb on - strand, within BWI76_RS26840 at 5564.247 kb on + strand, within BWI76_RS26840 at 5564.264 kb on + strand, within BWI76_RS26840 at 5564.367 kb on - strand, within BWI76_RS26840 at 5564.446 kb on - strand, within BWI76_RS26840 at 5564.464 kb on + strand, within BWI76_RS26840 at 5564.503 kb on + strand, within BWI76_RS26840 at 5564.512 kb on - strand, within BWI76_RS26840 at 5564.629 kb on - strand, within BWI76_RS26840 at 5564.700 kb on - strand, within BWI76_RS26840 at 5564.710 kb on - strand, within BWI76_RS26840 at 5564.763 kb on - strand, within BWI76_RS26840 at 5564.784 kb on + strand, within BWI76_RS26840 at 5564.937 kb on - strand, within BWI76_RS26840 at 5564.944 kb on + strand, within BWI76_RS26840 at 5564.996 kb on - strand, within BWI76_RS26840 at 5565.046 kb on + strand, within BWI76_RS26840 at 5565.054 kb on - strand, within BWI76_RS26840 at 5565.134 kb on - strand, within BWI76_RS26840 at 5565.180 kb on - strand, within BWI76_RS26840 at 5565.180 kb on - strand, within BWI76_RS26840 at 5565.243 kb on - strand, within BWI76_RS26840 at 5565.499 kb on + strand, within BWI76_RS26840 at 5565.586 kb on - strand, within BWI76_RS26840 at 5565.617 kb on + strand, within BWI76_RS26840 at 5565.710 kb on + strand, within BWI76_RS26840 at 5565.819 kb on + strand, within BWI76_RS26840 at 5565.968 kb on + strand, within BWI76_RS26840 at 5565.973 kb on + strand, within BWI76_RS26840 at 5565.981 kb on - strand, within BWI76_RS26840 at 5566.046 kb on - strand, within BWI76_RS26840 at 5566.080 kb on + strand, within BWI76_RS26840 at 5566.085 kb on + strand, within BWI76_RS26840 at 5566.085 kb on + strand, within BWI76_RS26840 at 5566.160 kb on - strand, within BWI76_RS26840 at 5566.198 kb on - strand, within BWI76_RS26840 at 5566.208 kb on + strand, within BWI76_RS26840 at 5566.321 kb on + strand, within BWI76_RS26840 at 5566.321 kb on + strand, within BWI76_RS26840 at 5566.429 kb on + strand, within BWI76_RS26840 at 5566.503 kb on + strand, within BWI76_RS26840 at 5566.542 kb on - strand at 5566.542 kb on - strand at 5566.705 kb on + strand at 5566.849 kb on - strand at 5566.867 kb on - strand at 5566.936 kb on - strand at 5567.124 kb on - strand at 5567.328 kb on + strand, within BWI76_RS26845 at 5567.518 kb on - strand, within BWI76_RS26845 at 5567.791 kb on - strand, within BWI76_RS26845 at 5567.810 kb on - strand, within BWI76_RS26845 at 5567.816 kb on + strand, within BWI76_RS26845 at 5567.911 kb on + strand, within BWI76_RS26845 at 5567.914 kb on - strand, within BWI76_RS26845
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 5,561,868 - BWI76_RS26830 0.49 -0.3 5,561,876 - BWI76_RS26830 0.50 -1.0 5,562,152 + BWI76_RS26830 0.77 -2.4 5,562,160 - BWI76_RS26830 0.78 -0.1 5,562,324 - -0.8 5,562,454 - BWI76_RS26835 0.13 +1.8 5,562,471 + BWI76_RS26835 0.17 +0.1 5,562,478 - BWI76_RS26835 0.18 +1.1 5,562,484 - BWI76_RS26835 0.19 -0.1 5,562,523 + BWI76_RS26835 0.28 +0.3 5,562,604 + BWI76_RS26835 0.45 +0.5 5,562,612 - BWI76_RS26835 0.46 +0.5 5,562,612 - BWI76_RS26835 0.46 -2.5 5,562,622 - BWI76_RS26835 0.49 +1.3 5,562,657 + BWI76_RS26835 0.56 +0.5 5,562,665 - BWI76_RS26835 0.58 +0.5 5,562,969 - +0.8 5,562,975 - +1.5 5,563,055 + +1.4 5,563,057 + +0.6 5,563,119 + +1.0 5,563,123 - -1.2 5,563,142 - +0.8 5,563,219 + +1.1 5,563,355 - BWI76_RS26840 0.12 +1.2 5,563,497 - BWI76_RS26840 0.16 +0.2 5,563,520 + BWI76_RS26840 0.16 +0.5 5,563,520 + BWI76_RS26840 0.16 +0.3 5,563,528 - +2.0 5,563,788 + BWI76_RS26840 0.23 +1.4 5,563,870 + BWI76_RS26840 0.25 -0.4 5,563,934 - BWI76_RS26840 0.26 +0.2 5,563,975 - BWI76_RS26840 0.27 +1.7 5,564,113 + BWI76_RS26840 0.31 +0.5 5,564,231 + BWI76_RS26840 0.34 +0.6 5,564,239 - BWI76_RS26840 0.34 -0.5 5,564,247 + BWI76_RS26840 0.34 +0.2 5,564,264 + BWI76_RS26840 0.34 +0.7 5,564,367 - BWI76_RS26840 0.37 +0.0 5,564,446 - BWI76_RS26840 0.39 +0.8 5,564,464 + BWI76_RS26840 0.39 +0.2 5,564,503 + BWI76_RS26840 0.40 +0.4 5,564,512 - BWI76_RS26840 0.41 +0.5 5,564,629 - BWI76_RS26840 0.43 +0.1 5,564,700 - BWI76_RS26840 0.45 +0.7 5,564,710 - BWI76_RS26840 0.45 +0.5 5,564,763 - BWI76_RS26840 0.47 +0.5 5,564,784 + BWI76_RS26840 0.47 +0.5 5,564,937 - BWI76_RS26840 0.51 +1.2 5,564,944 + BWI76_RS26840 0.51 +0.3 5,564,996 - BWI76_RS26840 0.53 +0.5 5,565,046 + BWI76_RS26840 0.54 +0.6 5,565,054 - BWI76_RS26840 0.54 -1.0 5,565,134 - BWI76_RS26840 0.56 +0.4 5,565,180 - BWI76_RS26840 0.57 +0.5 5,565,180 - BWI76_RS26840 0.57 +1.3 5,565,243 - BWI76_RS26840 0.59 -1.0 5,565,499 + BWI76_RS26840 0.65 +1.1 5,565,586 - BWI76_RS26840 0.67 +0.9 5,565,617 + BWI76_RS26840 0.68 +0.4 5,565,710 + BWI76_RS26840 0.70 +1.0 5,565,819 + BWI76_RS26840 0.73 +0.5 5,565,968 + BWI76_RS26840 0.76 +1.0 5,565,973 + BWI76_RS26840 0.77 +0.8 5,565,981 - BWI76_RS26840 0.77 +0.2 5,566,046 - BWI76_RS26840 0.78 +0.8 5,566,080 + BWI76_RS26840 0.79 +1.0 5,566,085 + BWI76_RS26840 0.79 -0.1 5,566,085 + BWI76_RS26840 0.79 -0.8 5,566,160 - BWI76_RS26840 0.81 -0.1 5,566,198 - BWI76_RS26840 0.82 +0.9 5,566,208 + BWI76_RS26840 0.82 +1.1 5,566,321 + BWI76_RS26840 0.85 +0.5 5,566,321 + BWI76_RS26840 0.85 +1.1 5,566,429 + BWI76_RS26840 0.88 -1.0 5,566,503 + BWI76_RS26840 0.90 +0.6 5,566,542 - +1.1 5,566,542 - -1.5 5,566,705 + +0.7 5,566,849 - +0.9 5,566,867 - +0.6 5,566,936 - +0.7 5,567,124 - +0.9 5,567,328 + BWI76_RS26845 0.17 +0.4 5,567,518 - BWI76_RS26845 0.25 -0.3 5,567,791 - BWI76_RS26845 0.36 +0.7 5,567,810 - BWI76_RS26845 0.37 -0.7 5,567,816 + BWI76_RS26845 0.37 +0.3 5,567,911 + BWI76_RS26845 0.41 +1.3 5,567,914 - BWI76_RS26845 0.41 +1.2
Or see this region's nucleotide sequence