Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12580 and BWI76_RS12585 overlap by 4 nucleotides BWI76_RS12585 and BWI76_RS12590 are separated by 264 nucleotides BWI76_RS12590 and BWI76_RS12595 are separated by 99 nucleotides BWI76_RS12595 and BWI76_RS12600 are separated by 81 nucleotides
BWI76_RS12580: BWI76_RS12580 - oxidoreductase, at 2,626,711 to 2,627,430
_RS12580
BWI76_RS12585: BWI76_RS12585 - transcriptional regulator, at 2,627,427 to 2,627,861
_RS12585
BWI76_RS12590: BWI76_RS12590 - helix-turn-helix-type transcriptional regulator, at 2,628,126 to 2,628,854
_RS12590
BWI76_RS12595: BWI76_RS12595 - hypothetical protein, at 2,628,954 to 2,629,298
_RS12595
BWI76_RS12600: BWI76_RS12600 - MFS transporter, at 2,629,380 to 2,630,501
_RS12600
Position (kb)
2628
2629 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2627.336 kb on - strand, within BWI76_RS12580 at 2627.404 kb on + strand at 2627.610 kb on + strand, within BWI76_RS12585 at 2627.726 kb on + strand, within BWI76_RS12585 at 2627.801 kb on + strand, within BWI76_RS12585 at 2627.815 kb on + strand, within BWI76_RS12585 at 2627.868 kb on + strand at 2627.868 kb on + strand at 2627.868 kb on + strand at 2628.058 kb on - strand at 2628.400 kb on - strand, within BWI76_RS12590 at 2628.416 kb on - strand, within BWI76_RS12590 at 2628.484 kb on - strand, within BWI76_RS12590 at 2628.771 kb on - strand, within BWI76_RS12590 at 2628.771 kb on - strand, within BWI76_RS12590 at 2629.141 kb on - strand, within BWI76_RS12595 at 2629.198 kb on + strand, within BWI76_RS12595 at 2629.230 kb on - strand, within BWI76_RS12595 at 2629.282 kb on - strand at 2629.372 kb on + strand at 2629.380 kb on - strand at 2629.819 kb on - strand, within BWI76_RS12600
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,627,336 - BWI76_RS12580 0.87 -0.4 2,627,404 + +0.1 2,627,610 + BWI76_RS12585 0.42 -0.0 2,627,726 + BWI76_RS12585 0.69 +0.0 2,627,801 + BWI76_RS12585 0.86 +1.9 2,627,815 + BWI76_RS12585 0.89 +0.5 2,627,868 + +0.0 2,627,868 + +0.6 2,627,868 + -0.5 2,628,058 - +0.7 2,628,400 - BWI76_RS12590 0.38 -2.7 2,628,416 - BWI76_RS12590 0.40 -1.4 2,628,484 - BWI76_RS12590 0.49 -0.5 2,628,771 - BWI76_RS12590 0.88 +0.1 2,628,771 - BWI76_RS12590 0.88 -1.2 2,629,141 - BWI76_RS12595 0.54 -0.6 2,629,198 + BWI76_RS12595 0.71 +0.3 2,629,230 - BWI76_RS12595 0.80 +0.2 2,629,282 - -1.0 2,629,372 + -1.2 2,629,380 - +0.0 2,629,819 - BWI76_RS12600 0.39 -1.0
Or see this region's nucleotide sequence