Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25800 and AO356_25805 are separated by 26 nucleotides AO356_25805 and AO356_25810 are separated by 17 nucleotides
AO356_25800: AO356_25800 - prevent-host-death protein, at 5,833,901 to 5,834,503
_25800
AO356_25805: AO356_25805 - hypothetical protein, at 5,834,530 to 5,836,134
_25805
AO356_25810: AO356_25810 - biopolymer transporter ExbB, at 5,836,152 to 5,837,951
_25810
Position (kb) 5834
5835
5836
5837 Strain fitness (log2 ratio) -1
0
1 at 5833.762 kb on + strand at 5833.991 kb on + strand, within AO356_25800 at 5833.992 kb on - strand, within AO356_25800 at 5834.066 kb on + strand, within AO356_25800 at 5834.261 kb on + strand, within AO356_25800 at 5834.261 kb on + strand, within AO356_25800 at 5834.262 kb on - strand, within AO356_25800 at 5834.262 kb on - strand, within AO356_25800 at 5834.493 kb on + strand at 5834.509 kb on - strand at 5834.509 kb on - strand at 5834.720 kb on - strand, within AO356_25805 at 5834.858 kb on - strand, within AO356_25805 at 5834.915 kb on - strand, within AO356_25805 at 5835.133 kb on + strand, within AO356_25805 at 5835.179 kb on - strand, within AO356_25805 at 5835.271 kb on + strand, within AO356_25805 at 5835.272 kb on - strand, within AO356_25805 at 5835.379 kb on + strand, within AO356_25805 at 5835.397 kb on + strand, within AO356_25805 at 5835.398 kb on - strand, within AO356_25805 at 5835.398 kb on - strand, within AO356_25805 at 5835.398 kb on - strand, within AO356_25805 at 5835.511 kb on + strand, within AO356_25805 at 5835.512 kb on - strand, within AO356_25805 at 5835.512 kb on - strand, within AO356_25805 at 5835.641 kb on - strand, within AO356_25805 at 5835.695 kb on - strand, within AO356_25805 at 5835.902 kb on - strand, within AO356_25805 at 5835.902 kb on - strand, within AO356_25805 at 5835.923 kb on - strand, within AO356_25805 at 5835.923 kb on - strand, within AO356_25805 at 5835.949 kb on + strand, within AO356_25805 at 5835.949 kb on + strand, within AO356_25805 at 5836.162 kb on + strand at 5836.162 kb on + strand at 5836.163 kb on - strand at 5836.163 kb on - strand at 5836.163 kb on - strand at 5836.168 kb on + strand at 5836.509 kb on + strand, within AO356_25810 at 5836.510 kb on - strand, within AO356_25810 at 5836.510 kb on - strand, within AO356_25810 at 5836.569 kb on + strand, within AO356_25810 at 5836.581 kb on + strand, within AO356_25810 at 5836.582 kb on - strand, within AO356_25810 at 5836.620 kb on - strand, within AO356_25810 at 5836.664 kb on + strand, within AO356_25810 at 5836.971 kb on + strand, within AO356_25810
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 5,833,762 + +0.5 5,833,991 + AO356_25800 0.15 +0.2 5,833,992 - AO356_25800 0.15 +1.0 5,834,066 + AO356_25800 0.27 -0.7 5,834,261 + AO356_25800 0.60 -1.4 5,834,261 + AO356_25800 0.60 +1.0 5,834,262 - AO356_25800 0.60 +0.1 5,834,262 - AO356_25800 0.60 +0.1 5,834,493 + +0.0 5,834,509 - +0.7 5,834,509 - +0.4 5,834,720 - AO356_25805 0.12 +0.3 5,834,858 - AO356_25805 0.20 +0.1 5,834,915 - AO356_25805 0.24 +0.4 5,835,133 + AO356_25805 0.38 -0.7 5,835,179 - AO356_25805 0.40 +0.6 5,835,271 + AO356_25805 0.46 -0.2 5,835,272 - AO356_25805 0.46 +0.2 5,835,379 + AO356_25805 0.53 +0.3 5,835,397 + AO356_25805 0.54 -0.2 5,835,398 - AO356_25805 0.54 -0.0 5,835,398 - AO356_25805 0.54 +0.4 5,835,398 - AO356_25805 0.54 +1.4 5,835,511 + AO356_25805 0.61 -0.3 5,835,512 - AO356_25805 0.61 +0.2 5,835,512 - AO356_25805 0.61 -0.6 5,835,641 - AO356_25805 0.69 -0.1 5,835,695 - AO356_25805 0.73 +0.8 5,835,902 - AO356_25805 0.85 -1.2 5,835,902 - AO356_25805 0.85 +1.2 5,835,923 - AO356_25805 0.87 -1.2 5,835,923 - AO356_25805 0.87 +0.7 5,835,949 + AO356_25805 0.88 +0.6 5,835,949 + AO356_25805 0.88 -0.5 5,836,162 + -0.0 5,836,162 + +0.2 5,836,163 - +1.1 5,836,163 - +0.3 5,836,163 - +0.2 5,836,168 + -0.0 5,836,509 + AO356_25810 0.20 +0.5 5,836,510 - AO356_25810 0.20 +0.3 5,836,510 - AO356_25810 0.20 +0.3 5,836,569 + AO356_25810 0.23 +0.1 5,836,581 + AO356_25810 0.24 -1.0 5,836,582 - AO356_25810 0.24 +0.9 5,836,620 - AO356_25810 0.26 +0.3 5,836,664 + AO356_25810 0.28 -1.2 5,836,971 + AO356_25810 0.46 +0.4
Or see this region's nucleotide sequence