Strain Fitness in Shewanella loihica PV-4 around Shew_1342

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,550,862	-		Shew_1340	0.11	+0.2
1,550,898	+		Shew_1340	0.20	+1.7
1,550,898	+		Shew_1340	0.20	-0.3
1,551,053	-		Shew_1340	0.56	-1.3
1,551,053	-		Shew_1340	0.56	+0.5
1,551,182	+		Shew_1340	0.86	-1.5
1,551,182	+		Shew_1340	0.86	-0.1
1,551,182	+		Shew_1340	0.86	+1.5
1,551,182	+		Shew_1340	0.86	-0.8
1,551,190	-		Shew_1340	0.88	+0.1
1,551,190	-		Shew_1340	0.88	+0.1
1,551,190	-		Shew_1340	0.88	-1.2
1,551,190	-		Shew_1340	0.88	-1.7
1,551,190	-		Shew_1340	0.88	-0.3
1,551,515	-		Shew_1341	0.83	+3.1
1,551,970	-	flgA	Shew_1342	0.40	-2.9
1,552,582	+				+0.2
1,552,660	+				-0.3
1,552,905	+		Shew_1343	0.33	+0.4
1,552,913	-		Shew_1343	0.33	+0.1
1,552,913	-		Shew_1343	0.33	-0.4
1,553,349	-		Shew_1343	0.81	+0.8
1,553,349	-		Shew_1343	0.81	+0.2
1,553,349	-		Shew_1343	0.81	+0.0
1,553,386	+		Shew_1343	0.85	+0.1
1,553,387	+		Shew_1343	0.85	+0.3
1,553,387	+		Shew_1343	0.85	+0.8
1,553,395	-		Shew_1343	0.86	-1.1
1,553,395	-		Shew_1343	0.86	+0.8
1,553,395	-		Shew_1343	0.86	-0.1
1,553,395	-		Shew_1343	0.86	+0.5