Strain Fitness in Shewanella loihica PV-4 around Shew_0953

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,095,609	-		Shew_0952	0.79	+0.4
1,095,678	-		Shew_0952	0.83	+0.3
1,095,678	-		Shew_0952	0.83	+0.6
1,096,048	+				+0.2
1,096,056	-				-0.1
1,096,213	-				+0.9
1,096,435	-				-0.5
1,096,518	-				+0.4
1,096,549	-				-0.4
1,096,611	-		Shew_0953	0.13	-0.2
1,096,909	-		Shew_0953	0.37	-1.7
1,096,925	+		Shew_0953	0.38	+0.1
1,097,372	+		Shew_0953	0.74	-1.0
1,097,538	-		Shew_0953	0.88	-0.0
1,097,565	-				+1.8
1,097,567	+				-0.5
1,097,639	+				+0.4
1,097,786	+				+2.3
1,097,807	+				-0.1
1,098,104	+		Shew_0954	0.33	-0.0
1,098,340	-		Shew_0954	0.63	-0.4