Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3790

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,339,991	+				+2.0
4,340,129	+				+0.0
4,340,129	+				+0.0
4,340,779	+				+1.9
4,340,779	+				+0.0
4,340,779	+				+1.6
4,340,780	-				+0.0
4,340,892	+				+0.0
4,340,892	+				+1.5
4,340,984	-				+0.0
4,341,019	+				+0.0
4,341,019	+				+0.0
4,341,019	+				+0.0
4,341,020	-				+0.0
4,341,235	+		Rru_A3790	0.25	-0.2
4,341,235	+		Rru_A3790	0.25	+0.1
4,341,236	-		Rru_A3790	0.26	+0.6
4,341,313	+		Rru_A3790	0.33	+0.3
4,341,313	+		Rru_A3790	0.33	-0.1
4,341,314	-		Rru_A3790	0.33	+0.4
4,341,409	+		Rru_A3790	0.43	+0.0
4,341,409	+		Rru_A3790	0.43	+0.2
4,341,410	-		Rru_A3790	0.43	+0.9
4,341,410	-		Rru_A3790	0.43	+0.1
4,341,410	-		Rru_A3790	0.43	+1.1
4,341,410	-		Rru_A3790	0.43	+0.3
4,341,410	-		Rru_A3790	0.43	+0.1
4,341,515	+		Rru_A3790	0.54	-0.3
4,341,515	+		Rru_A3790	0.54	+0.0
4,341,515	+		Rru_A3790	0.54	+0.5
4,341,570	-		Rru_A3790	0.59	+0.0
4,341,644	+		Rru_A3790	0.67	+0.0
4,341,644	+		Rru_A3790	0.67	+1.3
4,341,644	+		Rru_A3790	0.67	+0.0
4,341,644	+		Rru_A3790	0.67	+0.0
4,341,645	-		Rru_A3790	0.67	+0.0
4,341,645	-		Rru_A3790	0.67	+0.0
4,341,645	-		Rru_A3790	0.67	+0.0
4,341,645	-		Rru_A3790	0.67	+0.0
4,341,645	-		Rru_A3790	0.67	+0.0
4,341,645	-		Rru_A3790	0.67	-1.0
4,341,692	+		Rru_A3790	0.72	+0.0
4,341,693	-		Rru_A3790	0.72	+0.0
4,341,693	-		Rru_A3790	0.72	+0.4
4,341,703	+		Rru_A3790	0.73	-1.0
4,341,794	+		Rru_A3790	0.82	-0.9
4,341,794	+		Rru_A3790	0.82	-0.2
4,341,795	-		Rru_A3790	0.82	+1.2
4,341,795	-		Rru_A3790	0.82	+0.0
4,341,997	-				+0.0
4,341,997	-				+0.0
4,342,481	-				+1.4
4,342,541	-				+1.3
4,342,541	-				+0.0
4,342,546	+				+0.0
4,342,546	+				+1.2
4,342,546	+				-1.0
4,342,547	-				+0.0
4,342,547	-				+0.0
4,342,552	+				-2.0
4,342,552	+				+0.0
4,342,553	-				+0.0
4,342,553	-				+1.2
4,342,553	-				+0.9
4,342,553	-				+1.0
4,342,553	-				+1.5
4,342,553	-				+0.3