Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3751

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,298,532	-				+0.5
4,298,704	-		Rru_A3750	0.20	+1.2
4,298,710	+		Rru_A3750	0.21	+0.5
4,298,710	+		Rru_A3750	0.21	+0.0
4,298,711	-		Rru_A3750	0.21	+1.3
4,298,719	+		Rru_A3750	0.22	+0.0
4,298,720	-		Rru_A3750	0.22	+0.6
4,298,724	+		Rru_A3750	0.23	+1.7
4,298,725	-		Rru_A3750	0.23	-1.0
4,298,725	-		Rru_A3750	0.23	+0.5
4,298,725	-		Rru_A3750	0.23	+0.0
4,298,725	-		Rru_A3750	0.23	+1.2
4,298,862	+		Rru_A3750	0.44	+1.1
4,298,917	+		Rru_A3750	0.53	+1.0
4,299,031	+		Rru_A3750	0.71	+1.1
4,299,031	+		Rru_A3750	0.71	+0.8
4,299,080	-		Rru_A3750	0.79	+1.0
4,299,272	-				-1.6
4,299,272	-				+0.0
4,299,272	-				-1.7
4,299,272	-				-2.2
4,299,357	+				-1.2
4,299,408	+		Rru_A3751	0.10	-2.0
4,299,507	+		Rru_A3751	0.18	-1.7
4,299,507	+		Rru_A3751	0.18	-1.0
4,299,507	+		Rru_A3751	0.18	-3.0
4,299,507	+		Rru_A3751	0.18	-1.8
4,299,507	+		Rru_A3751	0.18	-1.9
4,299,507	+		Rru_A3751	0.18	-1.8
4,299,508	-		Rru_A3751	0.18	-2.0
4,299,508	-		Rru_A3751	0.18	-4.3
4,299,508	-		Rru_A3751	0.18	-1.9
4,299,508	-		Rru_A3751	0.18	+0.0
4,299,508	-		Rru_A3751	0.18	-0.7
4,299,544	-		Rru_A3751	0.21	-1.6
4,299,569	+		Rru_A3751	0.23	+0.0
4,299,569	+		Rru_A3751	0.23	+0.0
4,299,576	+		Rru_A3751	0.24	-2.4
4,299,577	-		Rru_A3751	0.24	-2.5
4,299,577	-		Rru_A3751	0.24	+0.0
4,299,589	-		Rru_A3751	0.25	+0.0
4,299,726	+		Rru_A3751	0.36	-0.6
4,299,804	+		Rru_A3751	0.42	-3.9
4,299,891	+		Rru_A3751	0.49	+0.0
4,299,891	+		Rru_A3751	0.49	+0.0
4,299,891	+		Rru_A3751	0.49	-1.0
4,299,891	+		Rru_A3751	0.49	-2.3
4,299,892	-		Rru_A3751	0.49	-1.8
4,299,892	-		Rru_A3751	0.49	+0.0
4,299,987	+		Rru_A3751	0.56	-2.2
4,299,987	+		Rru_A3751	0.56	-1.7
4,300,126	-		Rru_A3751	0.67	+0.0
4,300,272	+		Rru_A3751	0.79	-1.0
4,300,272	+		Rru_A3751	0.79	-2.5
4,300,273	-		Rru_A3751	0.79	+0.0
4,300,368	+		Rru_A3751	0.87	+0.0
4,300,368	+		Rru_A3751	0.87	-2.8
4,300,369	-		Rru_A3751	0.87	-1.8
4,300,428	+				+0.0
4,300,428	+				+0.0
4,300,428	+				+0.0
4,300,428	+				+0.0
4,300,428	+				-0.8
4,300,429	-				-1.0
4,300,429	-				-1.9
4,300,429	-				-1.5
4,300,429	-				-1.2
4,300,429	-				-1.9
4,300,429	-				-1.9
4,300,429	-				+0.0
4,300,456	-				-2.4
4,300,559	+				+0.9
4,300,559	+				+0.3
4,300,559	+				+0.0
4,300,560	-				+0.0
4,300,626	-				+0.0
4,300,626	-				+0.0
4,300,630	+				+1.1
4,300,638	-				+1.2
4,300,675	-				+0.0
4,300,693	-				+0.0
4,300,693	-				+0.0
4,300,910	+		Rru_A3752	0.56	+0.3
4,301,018	+		Rru_A3752	0.81	+0.0
4,301,018	+		Rru_A3752	0.81	+1.7
4,301,019	-		Rru_A3752	0.81	+0.0
4,301,128	+				+0.0
4,301,128	+				+0.0
4,301,129	-				+0.6
4,301,129	-				+1.2
4,301,153	-				+1.4
4,301,153	-				+1.3
4,301,308	+				+0.4
4,301,314	+				+1.3
4,301,315	-				-0.6
4,301,315	-				+1.0
4,301,351	-				+1.8
4,301,351	-				+0.0
4,301,401	+				+1.2
4,301,401	+				+0.0
4,301,402	-				+1.0
4,301,402	-				+1.2
4,301,454	+				+0.0