Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3749

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,296,401	+		Rru_A3748	0.17	-0.4
4,296,402	-		Rru_A3748	0.17	+0.0
4,296,402	-		Rru_A3748	0.17	+0.0
4,296,402	-		Rru_A3748	0.17	-1.0
4,296,648	+		Rru_A3748	0.39	+0.0
4,296,648	+		Rru_A3748	0.39	+0.0
4,296,829	-		Rru_A3748	0.56	+0.0
4,297,073	+		Rru_A3748	0.78	+0.0
4,297,073	+		Rru_A3748	0.78	+0.0
4,297,074	-		Rru_A3748	0.78	+1.4
4,297,074	-		Rru_A3748	0.78	+0.0
4,297,203	+		Rru_A3748	0.90	+0.0
4,297,203	+		Rru_A3748	0.90	-1.6
4,297,203	+		Rru_A3748	0.90	+0.0
4,297,203	+		Rru_A3748	0.90	+0.0
4,297,204	-		Rru_A3748	0.90	+0.0
4,297,314	+				+0.0
4,297,321	+				+0.0
4,297,322	-				+0.6
4,297,376	+				+0.8
4,297,376	+				+1.0
4,297,377	-				+0.0
4,297,377	-				+0.9
4,297,377	-				+1.0
4,297,377	-				-1.0
4,297,377	-				+1.1
4,297,381	+				+0.6
4,297,382	-				+1.8
4,297,382	-				-1.0
4,297,382	-				-1.6
4,297,683	-		Rru_A3749	0.24	+0.6
4,297,838	-		Rru_A3749	0.37	+0.0
4,297,928	-		Rru_A3749	0.45	-1.6
4,298,034	-		Rru_A3749	0.54	+0.7
4,298,090	-		Rru_A3749	0.58	+0.0
4,298,090	-		Rru_A3749	0.58	+0.0
4,298,136	-		Rru_A3749	0.62	+0.0
4,298,213	-		Rru_A3749	0.69	+0.9
4,298,253	-		Rru_A3749	0.72	+1.1
4,298,253	-		Rru_A3749	0.72	+0.5
4,298,253	-		Rru_A3749	0.72	+0.0
4,298,532	-				+0.5
4,298,704	-		Rru_A3750	0.20	+1.2
4,298,710	+		Rru_A3750	0.21	+0.5
4,298,710	+		Rru_A3750	0.21	+0.0
4,298,711	-		Rru_A3750	0.21	+1.3
4,298,719	+		Rru_A3750	0.22	+0.0
4,298,720	-		Rru_A3750	0.22	+0.6
4,298,724	+		Rru_A3750	0.23	+1.7
4,298,725	-		Rru_A3750	0.23	-1.0
4,298,725	-		Rru_A3750	0.23	+0.5
4,298,725	-		Rru_A3750	0.23	+0.0
4,298,725	-		Rru_A3750	0.23	+1.2
4,298,862	+		Rru_A3750	0.44	+1.1
4,298,917	+		Rru_A3750	0.53	+1.0
4,299,031	+		Rru_A3750	0.71	+1.1
4,299,031	+		Rru_A3750	0.71	+0.8
4,299,080	-		Rru_A3750	0.79	+1.0
4,299,272	-				-1.6
4,299,272	-				+0.0
4,299,272	-				-1.7
4,299,272	-				-2.2
4,299,357	+				-1.2
4,299,408	+		Rru_A3751	0.10	-2.0
4,299,507	+		Rru_A3751	0.18	-1.7
4,299,507	+		Rru_A3751	0.18	-1.0
4,299,507	+		Rru_A3751	0.18	-3.0
4,299,507	+		Rru_A3751	0.18	-1.8
4,299,507	+		Rru_A3751	0.18	-1.9
4,299,507	+		Rru_A3751	0.18	-1.8
4,299,508	-		Rru_A3751	0.18	-2.0
4,299,508	-		Rru_A3751	0.18	-4.3
4,299,508	-		Rru_A3751	0.18	-1.9
4,299,508	-		Rru_A3751	0.18	+0.0
4,299,508	-		Rru_A3751	0.18	-0.7
4,299,544	-		Rru_A3751	0.21	-1.6
4,299,569	+		Rru_A3751	0.23	+0.0
4,299,569	+		Rru_A3751	0.23	+0.0
4,299,576	+		Rru_A3751	0.24	-2.4
4,299,577	-		Rru_A3751	0.24	-2.5
4,299,577	-		Rru_A3751	0.24	+0.0