Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3731

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,281,814	+		Rru_A3729	0.90	+1.0
4,281,814	+		Rru_A3729	0.90	+0.0
4,281,814	+		Rru_A3729	0.90	-1.0
4,281,815	-		Rru_A3729	0.90	+0.0
4,281,815	-		Rru_A3729	0.90	+0.9
4,281,815	-		Rru_A3729	0.90	+1.2
4,281,815	-		Rru_A3729	0.90	+1.4
4,281,815	-		Rru_A3729	0.90	+0.9
4,281,832	+				+1.0
4,281,833	-				+1.0
4,281,833	-				+0.0
4,281,844	+				+0.8
4,281,845	-				+0.0
4,281,845	-				-0.2
4,281,845	-				+0.0
4,281,845	-				+0.6
4,281,877	+				-1.0
4,281,877	+				+0.0
4,281,877	+				+0.0
4,281,878	-				+0.0
4,281,878	-				+0.0
4,281,879	+				-1.0
4,282,019	-		Rru_A3730	0.10	+0.0
4,282,135	+		Rru_A3730	0.33	+0.6
4,282,136	-		Rru_A3730	0.33	+1.0
4,282,136	-		Rru_A3730	0.33	+0.7
4,282,204	+		Rru_A3730	0.46	+0.0
4,282,204	+		Rru_A3730	0.46	+1.6
4,282,204	+		Rru_A3730	0.46	+0.8
4,282,204	+		Rru_A3730	0.46	+1.1
4,282,204	+		Rru_A3730	0.46	+1.1
4,282,204	+		Rru_A3730	0.46	+1.0
4,282,205	-		Rru_A3730	0.46	+1.0
4,282,205	-		Rru_A3730	0.46	+0.0
4,282,205	-		Rru_A3730	0.46	+0.7
4,282,205	-		Rru_A3730	0.46	+0.6
4,282,205	-		Rru_A3730	0.46	+0.6
4,282,391	+		Rru_A3730	0.82	+0.0
4,282,393	+		Rru_A3730	0.82	+0.7
4,282,393	+		Rru_A3730	0.82	+0.0
4,282,393	+		Rru_A3730	0.82	+0.7
4,282,393	+		Rru_A3730	0.82	+0.3
4,282,393	+		Rru_A3730	0.82	+0.4
4,282,393	+		Rru_A3730	0.82	+0.7
4,282,394	-		Rru_A3730	0.83	+0.6
4,282,394	-		Rru_A3730	0.83	+0.0
4,282,394	-		Rru_A3730	0.83	+0.0
4,282,394	-		Rru_A3730	0.83	+0.6
4,282,481	+				-1.0
4,282,481	+				+0.0
4,282,481	+				+1.5
4,282,481	+				-1.0
4,282,481	+				+1.3
4,282,482	-				+0.2
4,282,482	-				+1.3
4,282,619	-				+1.6
4,282,645	+		Rru_A3731	0.12	+0.0
4,282,646	-		Rru_A3731	0.12	-1.4
4,282,646	-		Rru_A3731	0.12	+0.5
4,282,747	+		Rru_A3731	0.27	+0.1
4,282,748	-		Rru_A3731	0.27	+0.0
4,282,748	-		Rru_A3731	0.27	-1.0
4,282,805	-		Rru_A3731	0.35	+1.0
4,282,952	-		Rru_A3731	0.56	-1.0
4,283,068	+		Rru_A3731	0.73	+0.4
4,283,068	+		Rru_A3731	0.73	+0.5
4,283,069	-		Rru_A3731	0.73	+0.5
4,283,094	+		Rru_A3731	0.77	+1.5
4,283,094	+		Rru_A3731	0.77	+0.0
4,283,098	+		Rru_A3731	0.77	+0.2
4,283,098	+		Rru_A3731	0.77	+0.0
4,283,098	+		Rru_A3731	0.77	-0.5
4,283,099	-		Rru_A3731	0.78	-2.0
4,283,184	+		Rru_A3731	0.90	-0.7
4,283,184	+		Rru_A3731	0.90	+0.9
4,283,184	+		Rru_A3731	0.90	+0.5
4,283,266	+				+1.1
4,283,269	-				+1.7
4,283,269	-				+1.0
4,283,673	+				+1.2
4,283,704	+				+1.2
4,283,704	+				+0.3
4,283,705	-				+0.9
4,283,766	+				+2.1
4,283,823	+		Rru_A3733	0.10	+0.0
4,283,824	-		Rru_A3733	0.10	+2.1
4,283,824	-		Rru_A3733	0.10	+1.3
4,283,938	+		Rru_A3733	0.31	+1.4
4,283,939	-		Rru_A3733	0.31	+0.9
4,283,939	-		Rru_A3733	0.31	+0.0
4,283,939	-		Rru_A3733	0.31	-0.1
4,283,939	-		Rru_A3733	0.31	+0.0
4,283,939	-		Rru_A3733	0.31	+0.0
4,283,939	-		Rru_A3733	0.31	+2.0
4,284,121	-		Rru_A3733	0.63	+0.0
4,284,187	-		Rru_A3733	0.75	+1.1
4,284,248	+		Rru_A3733	0.86	+0.0
4,284,248	+		Rru_A3733	0.86	+1.4
4,284,248	+		Rru_A3733	0.86	+0.0
4,284,249	-		Rru_A3733	0.86	+0.9
4,284,249	-		Rru_A3733	0.86	+0.0
4,284,249	-		Rru_A3733	0.86	+1.1