Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3549

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,087,173	-		Rru_A3548	0.55	-2.2
4,087,195	+		Rru_A3548	0.56	-1.8
4,087,195	+		Rru_A3548	0.56	-1.4
4,087,195	+		Rru_A3548	0.56	-2.4
4,087,196	-		Rru_A3548	0.56	-1.0
4,087,196	-		Rru_A3548	0.56	-1.9
4,087,196	-		Rru_A3548	0.56	-2.8
4,087,196	-		Rru_A3548	0.56	-2.6
4,087,370	+		Rru_A3548	0.67	-0.0
4,087,371	-		Rru_A3548	0.67	-1.0
4,087,491	-		Rru_A3548	0.74	-1.8
4,087,491	-		Rru_A3548	0.74	-0.0
4,087,566	-		Rru_A3548	0.79	-0.8
4,087,566	-		Rru_A3548	0.79	-3.7
4,087,577	+		Rru_A3548	0.80	-0.7
4,087,577	+		Rru_A3548	0.80	-0.0
4,087,577	+		Rru_A3548	0.80	-0.0
4,087,577	+		Rru_A3548	0.80	-0.0
4,087,577	+		Rru_A3548	0.80	-0.0
4,087,578	-		Rru_A3548	0.80	-1.7
4,087,579	+		Rru_A3548	0.80	-0.0
4,087,579	+		Rru_A3548	0.80	-0.0
4,087,634	+		Rru_A3548	0.83	-2.0
4,087,689	-		Rru_A3548	0.87	-1.6
4,087,901	+				-0.0
4,087,901	+				-0.0
4,087,901	+				+1.1
4,087,901	+				+0.1
4,087,901	+				-0.4
4,087,901	+				+0.5
4,087,901	+				-0.0
4,087,902	-				+0.5
4,087,902	-				+0.3
4,087,902	-				-0.0
4,087,902	-				-0.0
4,087,902	-				+1.5
4,088,209	+				-0.0
4,088,209	+				-0.0
4,088,209	+				-0.5
4,088,210	-				+1.0
4,088,210	-				-0.0
4,088,212	-				-0.0
4,088,370	+		Rru_A3549	0.19	-0.0
4,088,370	+		Rru_A3549	0.19	-1.5
4,088,370	+		Rru_A3549	0.19	-1.1
4,088,370	+		Rru_A3549	0.19	-0.0
4,088,371	-		Rru_A3549	0.19	-1.0
4,088,371	-		Rru_A3549	0.19	+1.5
4,088,461	+		Rru_A3549	0.25	-0.0
4,088,572	+		Rru_A3549	0.32	-1.7
4,088,572	+		Rru_A3549	0.32	-0.0
4,088,572	+		Rru_A3549	0.32	-1.2
4,088,573	-		Rru_A3549	0.32	-0.0
4,088,599	-		Rru_A3549	0.34	-1.6
4,088,730	+		Rru_A3549	0.42	-0.0
4,088,731	-		Rru_A3549	0.42	-1.0
4,088,731	-		Rru_A3549	0.42	-0.6
4,089,451	+		Rru_A3549	0.89	-2.2
4,089,451	+		Rru_A3549	0.89	-2.3
4,089,452	-		Rru_A3549	0.89	-1.8
4,089,452	-		Rru_A3549	0.89	-1.0
4,089,454	-		Rru_A3549	0.89	-0.0
4,089,770	-				-0.0
4,089,771	+				-0.0
4,089,772	-				+0.5
4,089,772	-				-1.4
4,090,155	+		Rru_A3550	0.34	-0.0
4,090,155	+		Rru_A3550	0.34	-1.1
4,090,156	-		Rru_A3550	0.34	-1.0
4,090,287	+		Rru_A3550	0.42	-1.3
4,090,287	+		Rru_A3550	0.42	-0.0
4,090,287	+		Rru_A3550	0.42	-0.0
4,090,553	+		Rru_A3550	0.59	-0.0