Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3542

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,076,011	+		Rru_A3541	0.81	+1.7
4,076,011	+		Rru_A3541	0.81	+0.0
4,076,011	+		Rru_A3541	0.81	+0.0
4,076,011	+		Rru_A3541	0.81	+0.7
4,076,011	+		Rru_A3541	0.81	+1.2
4,076,012	-		Rru_A3541	0.81	+1.1
4,076,012	-		Rru_A3541	0.81	+1.3
4,076,012	-		Rru_A3541	0.81	+1.3
4,076,012	-		Rru_A3541	0.81	+1.7
4,076,012	-		Rru_A3541	0.81	+0.0
4,076,016	-		Rru_A3541	0.81	+0.0
4,076,016	-		Rru_A3541	0.81	+1.1
4,076,099	+		Rru_A3541	0.84	+0.0
4,076,100	-		Rru_A3541	0.84	+0.4
4,076,101	+		Rru_A3541	0.84	+0.0
4,076,188	+		Rru_A3541	0.87	+1.8
4,076,188	+		Rru_A3541	0.87	+1.4
4,076,228	+		Rru_A3541	0.89	+1.6
4,076,314	+				+2.3
4,076,375	-				+0.0
4,076,542	-				+0.0
4,076,651	-				+0.7
4,076,665	+				+2.2
4,076,666	-				+1.0
4,076,676	-				-0.0
4,076,680	+				+2.0
4,076,706	+				+2.5
4,076,838	-				+1.2
4,077,033	-				+0.6
4,077,089	+				-0.0
4,077,095	+				+0.4
4,077,096	-				-0.0
4,077,097	+				+0.6
4,077,112	+				+0.0
4,077,113	-				+0.3
4,077,888	-		Rru_A3542	0.43	-0.0
4,077,888	-		Rru_A3542	0.43	-0.0
4,077,888	-		Rru_A3542	0.43	-0.0
4,077,888	-		Rru_A3542	0.43	-0.3
4,077,889	+		Rru_A3542	0.43	+0.4
4,077,889	+		Rru_A3542	0.43	-0.0
4,077,889	+		Rru_A3542	0.43	+0.7
4,077,889	+		Rru_A3542	0.43	+0.5
4,077,889	+		Rru_A3542	0.43	+0.6
4,077,889	+		Rru_A3542	0.43	+0.6
4,077,890	-		Rru_A3542	0.44	+1.0
4,077,890	-		Rru_A3542	0.44	+1.0
4,078,043	+		Rru_A3542	0.50	+0.6
4,078,043	+		Rru_A3542	0.50	-0.0
4,078,043	+		Rru_A3542	0.50	-1.0
4,078,043	+		Rru_A3542	0.50	+0.2
4,078,044	-		Rru_A3542	0.50	+0.6
4,078,045	+		Rru_A3542	0.50	+0.5
4,078,045	+		Rru_A3542	0.50	+0.3
4,078,045	+		Rru_A3542	0.50	+0.3
4,078,045	+		Rru_A3542	0.50	-0.0
4,078,045	+		Rru_A3542	0.50	+1.6
4,078,045	+		Rru_A3542	0.50	+1.2
4,078,045	+		Rru_A3542	0.50	+0.0
4,078,046	-		Rru_A3542	0.50	-0.4
4,078,046	-		Rru_A3542	0.50	-0.0
4,078,433	+		Rru_A3542	0.68	+0.5
4,078,433	+		Rru_A3542	0.68	+0.8
4,078,433	+		Rru_A3542	0.68	+0.3
4,078,433	+		Rru_A3542	0.68	+0.6
4,078,434	-		Rru_A3542	0.68	-0.0
4,078,434	-		Rru_A3542	0.68	+0.2
4,078,434	-		Rru_A3542	0.68	+1.9
4,078,442	+		Rru_A3542	0.68	-0.1
4,078,443	-		Rru_A3542	0.68	-0.0
4,078,443	-		Rru_A3542	0.68	+0.2
4,078,802	+		Rru_A3542	0.84	+1.2
4,078,803	-		Rru_A3542	0.84	-0.0
4,078,803	-		Rru_A3542	0.84	-0.0
4,078,947	-				+0.4
4,079,011	+				+0.7
4,079,011	+				+0.3
4,079,011	+				+1.0
4,079,011	+				-1.0
4,079,012	-				-0.0