Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3530

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,060,834	+		Rru_A3529	0.42	+1.5
4,060,834	+		Rru_A3529	0.42	+0.0
4,060,834	+		Rru_A3529	0.42	+1.2
4,060,835	-		Rru_A3529	0.42	+0.0
4,060,835	-		Rru_A3529	0.42	+0.5
4,060,835	-		Rru_A3529	0.42	+1.3
4,061,098	+		Rru_A3529	0.62	+0.0
4,061,098	+		Rru_A3529	0.62	+0.9
4,061,099	-		Rru_A3529	0.62	+0.0
4,061,099	-		Rru_A3529	0.62	+1.0
4,061,099	-		Rru_A3529	0.62	+0.9
4,061,099	-		Rru_A3529	0.62	+1.3
4,061,099	-		Rru_A3529	0.62	+0.0
4,061,099	-		Rru_A3529	0.62	-1.0
4,061,099	-		Rru_A3529	0.62	+1.2
4,061,110	+		Rru_A3529	0.62	+2.3
4,061,110	+		Rru_A3529	0.62	+1.4
4,061,110	+		Rru_A3529	0.62	+1.2
4,061,111	-		Rru_A3529	0.63	-1.6
4,061,111	-		Rru_A3529	0.63	+1.3
4,061,131	+		Rru_A3529	0.64	+0.2
4,061,131	+		Rru_A3529	0.64	+0.0
4,061,131	+		Rru_A3529	0.64	-1.0
4,061,157	-		Rru_A3529	0.66	-1.0
4,061,176	+		Rru_A3529	0.67	+0.9
4,061,176	+		Rru_A3529	0.67	+1.2
4,061,285	+		Rru_A3529	0.75	+0.1
4,061,285	+		Rru_A3529	0.75	+0.0
4,061,285	+		Rru_A3529	0.75	+0.9
4,061,285	+		Rru_A3529	0.75	+1.6
4,061,285	+		Rru_A3529	0.75	+0.0
4,061,285	+		Rru_A3529	0.75	+0.6
4,061,285	+		Rru_A3529	0.75	+0.9
4,061,286	-		Rru_A3529	0.75	+0.3
4,061,286	-		Rru_A3529	0.75	+0.8
4,061,419	+		Rru_A3529	0.85	+1.7
4,061,419	+		Rru_A3529	0.85	+0.0
4,061,419	+		Rru_A3529	0.85	+0.3
4,061,419	+		Rru_A3529	0.85	+0.4
4,061,420	-		Rru_A3529	0.85	+0.0
4,061,420	-		Rru_A3529	0.85	+0.8
4,061,420	-		Rru_A3529	0.85	+0.7
4,061,710	+				+0.0
4,061,792	+				+0.0
4,061,792	+				+0.9
4,061,792	+				+0.0
4,061,793	-				+1.5
4,061,793	-				+0.0
4,061,793	-				+0.5
4,061,886	+				+0.1
4,061,906	-		Rru_A3530	0.11	-0.3
4,062,001	+		Rru_A3530	0.18	+0.0
4,062,001	+		Rru_A3530	0.18	+0.1
4,062,001	+		Rru_A3530	0.18	+0.0
4,062,002	-		Rru_A3530	0.19	+0.0
4,062,002	-		Rru_A3530	0.19	+1.3
4,062,002	-		Rru_A3530	0.19	+2.0
4,062,100	+		Rru_A3530	0.26	+0.0
4,062,100	+		Rru_A3530	0.26	+0.8
4,062,100	+		Rru_A3530	0.26	+1.5
4,062,100	+		Rru_A3530	0.26	+0.0
4,062,101	-		Rru_A3530	0.26	+0.0
4,062,150	+		Rru_A3530	0.30	+1.3
4,062,151	-		Rru_A3530	0.30	+1.5
4,062,181	+		Rru_A3530	0.33	+1.3
4,062,181	+		Rru_A3530	0.33	+1.6
4,062,181	+		Rru_A3530	0.33	+1.8
4,062,181	+		Rru_A3530	0.33	+0.0
4,062,182	-		Rru_A3530	0.33	+1.0
4,062,182	-		Rru_A3530	0.33	+0.0
4,062,182	-		Rru_A3530	0.33	+0.0
4,062,517	-		Rru_A3530	0.59	+1.8
4,062,917	+				+0.0
4,062,917	+				+0.9
4,062,917	+				+1.2
4,062,918	-				+2.0
4,062,918	-				+1.2
4,062,918	-				+0.9
4,062,918	-				+0.3
4,062,918	-				+0.9
4,063,559	-				+0.0
4,063,665	+				+1.7
4,063,859	+		Rru_A3532	0.38	+2.5
4,063,859	+		Rru_A3532	0.38	+3.0
4,063,859	+		Rru_A3532	0.38	+0.0
4,063,859	+		Rru_A3532	0.38	+0.0
4,063,859	+		Rru_A3532	0.38	+0.0
4,063,859	+		Rru_A3532	0.38	+0.0
4,063,860	-		Rru_A3532	0.38	+1.6
4,063,860	-		Rru_A3532	0.38	+1.9
4,063,860	-		Rru_A3532	0.38	+1.1
4,063,860	-		Rru_A3532	0.38	+2.0
4,063,860	-		Rru_A3532	0.38	+1.5
4,063,860	-		Rru_A3532	0.38	+0.0
4,063,860	-		Rru_A3532	0.38	+1.3