Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3528

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,058,819	+				+0.0
4,058,820	-				+0.0
4,058,826	+				+0.0
4,058,826	+				+0.0
4,058,827	-				+0.0
4,058,827	-				-0.8
4,058,865	-		Rru_A3527	0.16	+0.5
4,058,865	-		Rru_A3527	0.16	+0.0
4,058,979	+		Rru_A3527	0.54	+0.0
4,058,980	-		Rru_A3527	0.54	+0.0
4,058,980	-		Rru_A3527	0.54	+0.0
4,058,980	-		Rru_A3527	0.54	+0.0
4,058,980	-		Rru_A3527	0.54	+0.0
4,058,981	+		Rru_A3527	0.54	-1.0
4,058,982	-		Rru_A3527	0.55	+0.0
4,059,031	+		Rru_A3527	0.71	+0.7
4,059,031	+		Rru_A3527	0.71	+0.0
4,059,032	-		Rru_A3527	0.71	+0.0
4,059,158	+				-0.1
4,059,159	-				-1.0
4,059,159	-				+0.0
4,059,159	-				+1.1
4,059,423	-				-1.0
4,059,697	+		Rru_A3528	0.24	+0.0
4,059,698	-		Rru_A3528	0.24	+0.0
4,059,826	-		Rru_A3528	0.47	+0.0
4,059,826	-		Rru_A3528	0.47	-0.3
4,060,178	-				+0.0
4,060,376	-				+1.8
4,060,387	+				+0.5
4,060,387	+				+0.0
4,060,388	-				+0.7
4,060,388	-				+0.0
4,060,834	+		Rru_A3529	0.42	+1.5
4,060,834	+		Rru_A3529	0.42	+0.0
4,060,834	+		Rru_A3529	0.42	+1.2
4,060,835	-		Rru_A3529	0.42	+0.0
4,060,835	-		Rru_A3529	0.42	+0.5
4,060,835	-		Rru_A3529	0.42	+1.3
4,061,098	+		Rru_A3529	0.62	+0.0
4,061,098	+		Rru_A3529	0.62	+0.9
4,061,099	-		Rru_A3529	0.62	+0.0
4,061,099	-		Rru_A3529	0.62	+1.0
4,061,099	-		Rru_A3529	0.62	+0.9
4,061,099	-		Rru_A3529	0.62	+1.3
4,061,099	-		Rru_A3529	0.62	+0.0
4,061,099	-		Rru_A3529	0.62	-1.0
4,061,099	-		Rru_A3529	0.62	+1.2
4,061,110	+		Rru_A3529	0.62	+2.3
4,061,110	+		Rru_A3529	0.62	+1.4
4,061,110	+		Rru_A3529	0.62	+1.2
4,061,111	-		Rru_A3529	0.63	-1.6
4,061,111	-		Rru_A3529	0.63	+1.3