Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3492

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,017,255	-		Rru_A3490	0.79	+1.2
4,017,255	-		Rru_A3490	0.79	+0.8
4,017,472	-				+0.0
4,017,475	+				+0.0
4,017,476	-				+0.9
4,017,476	-				+1.5
4,017,515	+				+0.0
4,017,642	+				-1.0
4,017,647	+				+0.0
4,017,648	-				+0.0
4,017,648	-				+0.0
4,017,697	+				+0.1
4,017,789	-				+1.1
4,017,807	+		Rru_A3491	0.17	+0.0
4,017,808	-		Rru_A3491	0.18	+1.3
4,017,890	+		Rru_A3491	0.55	+1.0
4,017,890	+		Rru_A3491	0.55	+0.0
4,017,890	+		Rru_A3491	0.55	+1.0
4,017,891	-		Rru_A3491	0.56	+2.6
4,017,891	-		Rru_A3491	0.56	+1.0
4,017,988	-				+0.9
4,017,988	-				+1.2
4,018,066	-				+0.7
4,018,066	-				+1.7
4,018,066	-				+0.3
4,018,070	+				+1.2
4,018,070	+				+1.3
4,018,071	-				+0.0
4,018,071	-				+1.6
4,018,437	+				+0.0
4,018,437	+				-0.2
4,018,438	-				+0.0
4,018,447	-		Rru_A3492	0.10	+1.3
4,018,930	+		Rru_A3492	0.25	-1.0
4,019,581	+		Rru_A3492	0.46	+0.7
4,019,634	+		Rru_A3492	0.48	+0.6
4,019,634	+		Rru_A3492	0.48	+0.0
4,019,994	+		Rru_A3492	0.60	+0.0
4,019,994	+		Rru_A3492	0.60	+0.0
4,019,995	-		Rru_A3492	0.60	+1.3
4,019,995	-		Rru_A3492	0.60	+0.1
4,020,018	+		Rru_A3492	0.60	+1.2
4,020,018	+		Rru_A3492	0.60	+0.9
4,020,123	+		Rru_A3492	0.64	-1.5
4,020,123	+		Rru_A3492	0.64	+0.5
4,020,124	-		Rru_A3492	0.64	+1.3
4,020,124	-		Rru_A3492	0.64	+0.0
4,020,194	+		Rru_A3492	0.66	-1.0
4,020,194	+		Rru_A3492	0.66	-1.5
4,020,195	-		Rru_A3492	0.66	-0.1
4,020,304	-		Rru_A3492	0.69	+0.8
4,020,396	+		Rru_A3492	0.72	+0.0
4,020,543	+		Rru_A3492	0.77	+0.4
4,020,544	-		Rru_A3492	0.77	-0.3
4,020,597	+		Rru_A3492	0.79	+0.0
4,020,597	+		Rru_A3492	0.79	+0.3
4,020,597	+		Rru_A3492	0.79	+0.3
4,020,598	-		Rru_A3492	0.79	+0.0
4,020,619	+		Rru_A3492	0.80	+0.0
4,020,620	-		Rru_A3492	0.80	+0.9
4,020,663	+		Rru_A3492	0.81	+0.7
4,020,663	+		Rru_A3492	0.81	+0.8
4,020,663	+		Rru_A3492	0.81	+1.5
4,020,664	-		Rru_A3492	0.81	+1.0
4,020,696	+		Rru_A3492	0.82	+0.9
4,020,696	+		Rru_A3492	0.82	+1.1
4,020,696	+		Rru_A3492	0.82	+0.0
4,020,697	-		Rru_A3492	0.82	-1.0
4,020,697	-		Rru_A3492	0.82	+0.0
4,020,697	-		Rru_A3492	0.82	+0.2
4,020,849	+		Rru_A3492	0.87	-0.3
4,020,849	+		Rru_A3492	0.87	+0.3
4,020,850	-		Rru_A3492	0.87	+0.6
4,020,850	-		Rru_A3492	0.87	+0.8
4,020,850	-		Rru_A3492	0.87	+0.0
4,020,850	-		Rru_A3492	0.87	+0.0
4,020,914	-		Rru_A3492	0.89	+0.0
4,021,014	+				+1.0
4,021,015	-				+0.9
4,021,086	+				+0.0
4,021,087	-				+1.5
4,021,087	-				-1.0
4,021,094	+				+0.0
4,021,095	-				+0.0
4,021,143	+				+0.0
4,021,143	+				+1.3
4,021,253	-				+0.0
4,021,320	-				-1.0
4,021,421	-				+0.0
4,021,731	-		Rru_A3493	0.52	+0.0
4,021,881	+				+0.0
4,021,881	+				+0.0
4,021,881	+				+1.4
4,021,881	+				+1.3
4,021,882	-				+1.4
4,021,882	-				+1.3
4,021,882	-				+1.2
4,021,882	-				+1.2
4,021,882	-				+1.1
4,021,882	-				+1.8
4,021,882	-				+1.0
4,021,882	-				+1.0
4,022,151	+		Rru_A3494	0.14	+0.8
4,022,151	+		Rru_A3494	0.14	+0.0
4,022,152	-		Rru_A3494	0.14	+0.0
4,022,152	-		Rru_A3494	0.14	+1.7
4,022,152	-		Rru_A3494	0.14	+1.4