Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3476

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,998,947	+		Rru_A3474	0.30	+0.5
3,998,947	+		Rru_A3474	0.30	+0.0
3,998,947	+		Rru_A3474	0.30	+0.6
3,998,947	+		Rru_A3474	0.30	+0.8
3,998,948	-		Rru_A3474	0.30	+0.0
3,998,948	-		Rru_A3474	0.30	+0.3
3,999,191	+		Rru_A3474	0.80	+0.0
3,999,191	+		Rru_A3474	0.80	+1.0
3,999,192	-		Rru_A3474	0.80	+0.2
3,999,192	-		Rru_A3474	0.80	+0.0
3,999,193	+		Rru_A3474	0.80	+0.0
3,999,193	+		Rru_A3474	0.80	+0.0
3,999,194	-		Rru_A3474	0.81	+0.0
3,999,214	+		Rru_A3474	0.85	+0.7
3,999,214	+		Rru_A3474	0.85	+2.0
3,999,214	+		Rru_A3474	0.85	+1.5
3,999,214	+		Rru_A3474	0.85	+0.0
3,999,215	-		Rru_A3474	0.85	+0.3
3,999,215	-		Rru_A3474	0.85	+1.3
3,999,305	+				+0.4
3,999,331	+				+0.0
3,999,331	+				-1.0
3,999,332	-				+0.0
3,999,332	-				+1.8
3,999,332	-				+1.1
3,999,357	-				+0.0
3,999,423	+				+0.3
3,999,423	+				+1.0
3,999,423	+				+0.9
3,999,423	+				+0.0
3,999,425	+				+0.9
3,999,475	+				+1.0
3,999,475	+				+0.0
3,999,475	+				+0.4
3,999,475	+				+1.2
3,999,908	+				+0.7
4,000,001	+				-1.0
4,000,296	-		Rru_A3476	0.42	+0.0
4,000,312	+		Rru_A3476	0.44	+0.0
4,000,313	-		Rru_A3476	0.44	+0.0
4,000,604	+		Rru_A3476	0.77	+0.0
4,000,633	-		Rru_A3476	0.81	+0.0
4,000,806	+				+2.6
4,000,821	+				+0.8
4,001,010	+				+0.6
4,001,010	+				+0.0
4,001,010	+				+0.0
4,001,010	+				+0.0
4,001,011	-				+1.2
4,001,011	-				+0.0
4,001,011	-				+0.0
4,001,011	-				+0.0
4,001,011	-				+1.2
4,001,011	-				-1.0
4,001,011	-				+0.7
4,001,011	-				+1.7
4,001,013	+				+0.0
4,001,013	+				+0.9
4,001,014	-				+0.0
4,001,015	+				+0.8
4,001,016	-				+0.9
4,001,279	+		Rru_A3477	0.30	+0.6
4,001,279	+		Rru_A3477	0.30	+1.6
4,001,279	+		Rru_A3477	0.30	+0.0
4,001,279	+		Rru_A3477	0.30	+0.0
4,001,279	+		Rru_A3477	0.30	+1.5
4,001,279	+		Rru_A3477	0.30	+0.0
4,001,280	-		Rru_A3477	0.30	+0.8
4,001,280	-		Rru_A3477	0.30	+0.0