Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3435
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,958,954 | + | +0.8 | |||
3,958,954 | + | +0.0 | |||
3,958,955 | - | +0.0 | |||
3,958,955 | - | +1.2 | |||
3,958,955 | - | +0.0 | |||
3,958,955 | - | +1.2 | |||
3,959,371 | + | Rru_A3436 | 0.55 | +0.0 | |
3,959,371 | + | Rru_A3436 | 0.55 | +0.0 | |
3,959,372 | - | Rru_A3436 | 0.55 | +0.0 | |
3,959,722 | + | +0.5 | |||
3,959,723 | - | +1.1 | |||
3,959,736 | + | +0.6 |
Or see this region's nucleotide sequence