Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3425

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,941,716	+				+0.2
3,941,717	-				+2.7
3,941,717	-				-2.6
3,941,812	+				+0.7
3,941,813	-				+2.9
3,941,813	-				+2.4
3,941,813	-				+1.9
3,941,813	-				+3.6
3,942,039	+		Rru_A3424	0.30	+0.0
3,942,039	+		Rru_A3424	0.30	+0.5
3,942,039	+		Rru_A3424	0.30	-1.0
3,942,040	-		Rru_A3424	0.30	+0.0
3,942,867	+		Rru_A3425	0.47	-0.7
3,942,868	-		Rru_A3425	0.47	-1.4
3,942,952	-		Rru_A3425	0.60	-2.0
3,942,952	-		Rru_A3425	0.60	-1.6
3,942,952	-		Rru_A3425	0.60	-1.5
3,942,952	-		Rru_A3425	0.60	+0.0
3,943,266	-				+1.1
3,943,469	+		Rru_A3426	0.19	+0.7
3,943,469	+		Rru_A3426	0.19	+1.1
3,943,469	+		Rru_A3426	0.19	+1.4
3,943,470	-		Rru_A3426	0.19	+0.0
3,943,485	+		Rru_A3426	0.20	+0.0
3,943,485	+		Rru_A3426	0.20	+0.6
3,943,485	+		Rru_A3426	0.20	+1.5
3,943,485	+		Rru_A3426	0.20	+1.3
3,943,486	-		Rru_A3426	0.20	+1.7
3,943,486	-		Rru_A3426	0.20	-1.0
3,943,486	-		Rru_A3426	0.20	+1.1
3,943,486	-		Rru_A3426	0.20	+0.2
3,943,486	-		Rru_A3426	0.20	-1.0
3,943,487	+		Rru_A3426	0.21	+1.1
3,943,488	-		Rru_A3426	0.21	+1.3
3,943,488	-		Rru_A3426	0.21	+0.0
3,943,544	+		Rru_A3426	0.25	+1.0
3,943,544	+		Rru_A3426	0.25	+1.3
3,943,544	+		Rru_A3426	0.25	+1.0
3,943,544	+		Rru_A3426	0.25	+0.0
3,943,544	+		Rru_A3426	0.25	+1.1
3,943,544	+		Rru_A3426	0.25	+0.4
3,943,544	+		Rru_A3426	0.25	+1.1
3,943,544	+		Rru_A3426	0.25	+0.0
3,943,545	-		Rru_A3426	0.25	+0.6
3,943,545	-		Rru_A3426	0.25	+1.3
3,943,632	+		Rru_A3426	0.32	+0.9
3,943,831	-		Rru_A3426	0.47	+0.0
3,943,831	-		Rru_A3426	0.47	+2.0
3,943,831	-		Rru_A3426	0.47	+1.9
3,943,915	+		Rru_A3426	0.54	+1.3
3,943,916	-		Rru_A3426	0.54	+1.0
3,943,916	-		Rru_A3426	0.54	+0.0
3,944,022	+		Rru_A3426	0.62	+0.7
3,944,046	+		Rru_A3426	0.64	+1.1
3,944,047	-		Rru_A3426	0.64	+1.0
3,944,047	-		Rru_A3426	0.64	-1.0
3,944,109	-		Rru_A3426	0.69	+1.3