Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3410

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,926,564	+		Rru_A3409	0.11	+0.0
3,926,582	+		Rru_A3409	0.13	+0.0
3,926,583	-		Rru_A3409	0.13	+1.3
3,926,583	-		Rru_A3409	0.13	+0.7
3,926,583	-		Rru_A3409	0.13	+1.6
3,926,701	+		Rru_A3409	0.26	+0.8
3,926,701	+		Rru_A3409	0.26	+0.0
3,926,845	+		Rru_A3409	0.43	+0.0
3,926,846	-		Rru_A3409	0.43	+0.8
3,926,897	-		Rru_A3409	0.49	+0.9
3,926,950	+		Rru_A3409	0.55	+0.0
3,926,951	-		Rru_A3409	0.55	+1.0
3,926,951	-		Rru_A3409	0.55	+0.0
3,926,962	+		Rru_A3409	0.56	+0.0
3,926,962	+		Rru_A3409	0.56	+1.1
3,926,962	+		Rru_A3409	0.56	+1.6
3,926,962	+		Rru_A3409	0.56	+0.0
3,926,962	+		Rru_A3409	0.56	+0.0
3,926,963	-		Rru_A3409	0.56	+1.0
3,926,963	-		Rru_A3409	0.56	+0.0
3,926,963	-		Rru_A3409	0.56	+0.8
3,926,963	-		Rru_A3409	0.56	+0.8
3,926,963	-		Rru_A3409	0.56	+1.5
3,927,067	+		Rru_A3409	0.68	+1.6
3,927,068	-		Rru_A3409	0.68	-1.6
3,927,068	-		Rru_A3409	0.68	+0.0
3,927,068	-		Rru_A3409	0.68	+1.4
3,927,068	-		Rru_A3409	0.68	+1.3
3,927,346	+				+0.0
3,927,347	-				+0.0
3,927,378	-				+0.0
3,927,389	-				+0.0
3,927,510	-				+0.0
3,927,610	+		Rru_A3410	0.18	+0.0
3,927,735	-		Rru_A3410	0.50	+2.1
3,927,735	-		Rru_A3410	0.50	+1.6
3,927,738	+		Rru_A3410	0.51	-1.0
3,927,739	-		Rru_A3410	0.51	+0.0
3,927,739	-		Rru_A3410	0.51	+2.3
3,927,739	-		Rru_A3410	0.51	+0.9
3,927,739	-		Rru_A3410	0.51	+1.1
3,927,806	+		Rru_A3410	0.68	+0.0
3,927,806	+		Rru_A3410	0.68	+0.0
3,927,807	-		Rru_A3410	0.68	+1.1
3,927,807	-		Rru_A3410	0.68	+1.5
3,927,924	+				+0.9
3,927,924	+				+0.0
3,927,925	-				-0.1
3,928,276	-				+0.0
3,928,495	+				+0.8
3,928,495	+				+1.2
3,928,496	-				+0.0
3,928,654	+		Rru_A3412	0.23	+0.0
3,928,654	+		Rru_A3412	0.23	+0.9
3,928,655	-		Rru_A3412	0.23	+1.0
3,928,719	-		Rru_A3412	0.28	+0.0
3,928,720	+		Rru_A3412	0.28	+1.0
3,928,720	+		Rru_A3412	0.28	+0.9
3,928,720	+		Rru_A3412	0.28	+1.5
3,928,721	-		Rru_A3412	0.28	+1.8
3,928,721	-		Rru_A3412	0.28	+0.0
3,928,721	-		Rru_A3412	0.28	+0.0
3,928,721	-		Rru_A3412	0.28	+0.9
3,928,721	-		Rru_A3412	0.28	+1.2
3,928,721	-		Rru_A3412	0.28	+0.4
3,928,783	+		Rru_A3412	0.33	+1.5
3,928,784	-		Rru_A3412	0.33	+1.0
3,928,784	-		Rru_A3412	0.33	+1.1
3,928,784	-		Rru_A3412	0.33	-0.1
3,928,784	-		Rru_A3412	0.33	+0.0
3,928,830	-		Rru_A3412	0.37	+1.1
3,928,830	-		Rru_A3412	0.37	+0.9
3,928,915	+		Rru_A3412	0.44	+0.7
3,928,915	+		Rru_A3412	0.44	+0.0