Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3408

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,925,424	+		Rru_A3408	0.19	+0.9
3,925,424	+		Rru_A3408	0.19	+0.0
3,925,424	+		Rru_A3408	0.19	+0.0
3,925,424	+		Rru_A3408	0.19	+2.4
3,925,425	-		Rru_A3408	0.19	+1.8
3,925,425	-		Rru_A3408	0.19	+0.0
3,925,445	+		Rru_A3408	0.21	+0.0
3,925,446	-		Rru_A3408	0.21	+1.6
3,925,513	+		Rru_A3408	0.27	+1.7
3,925,514	-		Rru_A3408	0.28	+1.0
3,925,536	+		Rru_A3408	0.30	+1.0
3,925,537	-		Rru_A3408	0.30	+0.0
3,925,676	+		Rru_A3408	0.43	+1.2
3,925,916	+		Rru_A3408	0.66	+1.2
3,925,916	+		Rru_A3408	0.66	+0.8
3,925,917	-		Rru_A3408	0.66	+0.9
3,925,917	-		Rru_A3408	0.66	+0.0
3,925,917	-		Rru_A3408	0.66	+1.4
3,925,917	-		Rru_A3408	0.66	+1.1
3,925,917	-		Rru_A3408	0.66	-1.0
3,926,021	+		Rru_A3408	0.75	+0.0
3,926,021	+		Rru_A3408	0.75	+1.4
3,926,021	+		Rru_A3408	0.75	+1.3
3,926,021	+		Rru_A3408	0.75	+1.6
3,926,021	+		Rru_A3408	0.75	+1.4
3,926,021	+		Rru_A3408	0.75	+0.6
3,926,021	+		Rru_A3408	0.75	+0.0
3,926,021	+		Rru_A3408	0.75	+0.5
3,926,021	+		Rru_A3408	0.75	+0.3
3,926,022	-		Rru_A3408	0.76	+0.0
3,926,022	-		Rru_A3408	0.76	+0.0
3,926,022	-		Rru_A3408	0.76	+1.0
3,926,022	-		Rru_A3408	0.76	+0.9
3,926,249	+				+0.8
3,926,250	-				+1.0
3,926,290	+				+1.0
3,926,290	+				+1.9
3,926,313	+				+1.1
3,926,376	+				+1.0
3,926,376	+				+0.0
3,926,376	+				+1.4
3,926,376	+				+0.6
3,926,376	+				+0.0
3,926,376	+				+0.0
3,926,377	-				+0.0
3,926,377	-				+0.0
3,926,564	+		Rru_A3409	0.11	+0.0
3,926,582	+		Rru_A3409	0.13	+0.0
3,926,583	-		Rru_A3409	0.13	+1.3
3,926,583	-		Rru_A3409	0.13	+0.7
3,926,583	-		Rru_A3409	0.13	+1.6
3,926,701	+		Rru_A3409	0.26	+0.8
3,926,701	+		Rru_A3409	0.26	+0.0
3,926,845	+		Rru_A3409	0.43	+0.0
3,926,846	-		Rru_A3409	0.43	+0.8
3,926,897	-		Rru_A3409	0.49	+0.9
3,926,950	+		Rru_A3409	0.55	+0.0
3,926,951	-		Rru_A3409	0.55	+1.0
3,926,951	-		Rru_A3409	0.55	+0.0
3,926,962	+		Rru_A3409	0.56	+0.0
3,926,962	+		Rru_A3409	0.56	+1.1
3,926,962	+		Rru_A3409	0.56	+1.6
3,926,962	+		Rru_A3409	0.56	+0.0
3,926,962	+		Rru_A3409	0.56	+0.0
3,926,963	-		Rru_A3409	0.56	+1.0
3,926,963	-		Rru_A3409	0.56	+0.0
3,926,963	-		Rru_A3409	0.56	+0.8
3,926,963	-		Rru_A3409	0.56	+0.8
3,926,963	-		Rru_A3409	0.56	+1.5
3,927,067	+		Rru_A3409	0.68	+1.6
3,927,068	-		Rru_A3409	0.68	-1.6
3,927,068	-		Rru_A3409	0.68	+0.0
3,927,068	-		Rru_A3409	0.68	+1.4
3,927,068	-		Rru_A3409	0.68	+1.3